Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01384 ATGGAACAGAAGAGCTTGTTGATATCGGCGCTGAGTGTTGGGGTTGGAGTGGGAGTTGGGATAGGCTTAGCTTCTGGACAAAGCCTTGGTAGCACATGGGGTGCAACTTCTTCTTCTTCTTCAAACTCAAACGCCATCACTCCCATGAAATTGGAGCAGGAAATGCTTAAACTCGTGATTGATGGCGGAGACAGCAACATTACTTTTGATAACTTCCCTTATTATCTCAGTGAGCAGACAAAGGTTTTGTTGATAAGTGCCGCTTATGTTCATTTAAAGCATGCTGATATTTCCAAATATACGCGCAATCTTGCTCCTGCAAGCCGAACTATTCTGCTTTCAGGGCCAGCAGAACTTTACCAGCAGGTTTATGCCAAGGCTTTGGCTCACTACTTTAAGGCCAAGTTGCTTCTCTTGGATTTAACTGACTTTTCGTTGAAGATTCAGAGTAGATATGGTTCTTCTGCAAACAAGGAATCTGCTTCCTTCAAAAGATCTACTTCAGAGTCCACTCTGGAGCGGTTATCTGACATGTTTGGATCATTTTCAATCTTTTCACAGAGGGAAGAGCCTAAGGTTGCAGGCAAAATACAGAGGCAAAGCAGTGCAATGGACCTCCGATCAATGGGGACTGAAGGATCTTGTAATCCTCCTAAGATTCGTCGAAATGTGTCTGCCTCCGCAAATATTAGTAGCCTTGCCTTGCAAAGCAATTCTTCAAATTCAGCTCCTCTGAAGCGCACAACCAGCTGGTCTTTTGATGAGAAGCTTCTTATACTGACCCTTTACAAGGTTCTGCTTTTTGTGTCAAAAACCAATCCCATTGTGCTATATCTGCGAGATGTTGACAAGTTGCTACATAGATCAACAAGGATTTTTAACCTGTTCCAGAAAATGTTGAGTAAATTATCTGGACCAATTCTGATTCTTGGTTCACGAGTTTTGGATGCTGATAACGACTTCCAAGAGGTAGATGACAGACTTAGTTTGCTGTTCCCTTACAATCTGGTAATCAGACCCCCAGAAGATGAATCGCATCTCGTCAGCTGGAAGAGTCGGTTTGAAGAGGACATGAAGATGATACAGGTTCAGGATAACAAGAACCATATCATGGAAGTGCTTGCAGCCAATGATCTTGATTGTGATGACCTGGACTCTGTCTGTGTGGCGGACACAATGGTTCTCAGCAACTATATAGAAGAGATTGTTGTGTCTGCAATTTCATATCATTTAATGAATAACAAAGATCCTGAATACAGAAATGGGAAACTTGTTATTCCATGCAATAGTTTGTCCCGTGCATTGAGTATATTCGAGGAAGGGAAATTCAGTGAAAAAGATACGTTAAAATTAGAAGCTCAGGCAGTAAAATCTGAGAAAAAGGAAGAACCTGCTATGAAACGAGAAGCAAAGTCTGAAAATCCTGTTCCTGTTAAGAAGGCTGAAGCAGAAATATCAACTTCAGTGGTAAAGGCTGAGGGTGAAAACTCAGCTCCAGCTCCCAAAGTTGAAGTTCCTCCTGATAATGAATTCGAGAAGCGAATAAGACCTGCGGTAATACCAGCAAATGAAATTGGTGTGACATTCTCAGATATTGGTGCCTTAGATGAGACCAAGGAATCCCTTCAAGAACTAGTAATGCTTCCTCTTCGAAGGCCGGATCTCTTCAAAGGAGGCCTTCTAAAGCCCTGTAGAGGAATATTGCTGTTTGGTCCTCCTGGCACTGGAAAGACAATGCTGGCAAAGGCCATCGCGAACGAGGCCGGGGCAAGTTTCATAAACGTGTCCATGTCTACCATCACTTCCAAATGGTTTGGTGAAGATGAGAAGAATGTTCGCGCTTTATTCACGCTGGCAGCCAAGGTCTCGCCAACAATCATATTTGTTGATGAGGTTGACAGCATGCTTGGGCAACGGAGCAGAGTTGGGGAGCATGAAGCCATGAGGAAAATCAAGAATGAGTTTATGACTCACTGGGATGGACTAATGACAAAACCGGGGGAGCGCATCCTTGTTCTTGCTGCAACCAATAGGCCCTTTGACTTGGATGAAGCAATTATTAGGAGATTTGAAAGAAGAATTATGGTAGGGCTACCATCTGTGGAGAATAGGGAAAAAATTTTGAAGACACTTCTGGCAAAAGAGAAGGTGGACGAGGATCTTGATTTGAAGGAACTTGCAACTATGACGGAAGGATACAGTGGCAGTGACTTGAAGAACTTGTGCATAACTGCTGCTTATAGGCCTGTTAGAGAGTTGATTCAACAAGAGAGACTAAAGACTCTGGAGGAAAAGCAGAAAGGTAGCCAAGGAGATAGTCCGGATACAGAAGATGAAGTTAAGCAGAAAAGGGTTATTAAACCTAGGCCCTTGAATATGCAGGACTTGAAAGAGGCAAAGAATCAAGTAGCTGCAAGCTTTG 2422 0.431 MEQKSLLISALSVGVGVGVGIGLASGQSLGSTWGATSSSSSNSNAITPMKLEQEMLKLVIDGGDSNITFDNFPYYLSEQTKVLLISAAYVHLKHADISKYTRNLAPASRTILLSGPAELYQQVYAKALAHYFKAKLLLLDLTDFSLKIQSRYGSSANKESASFKRSTSESTLERLSDMFGSFSIFSQREEPKVAGKIQRQSSAMDLRSMGTEGSCNPPKIRRNVSASANISSLALQSNSSNSAPLKRTTSWSFDEKLLILTLYKVLLFVSKTNPIVLYLRDVDKLLHRSTRIFNLFQKMLSKLSGPILILGSRVLDADNDFQEVDDRLSLLFPYNLVIRPPEDESHLVSWKSRFEEDMKMIQVQDNKNHIMEVLAANDLDCDDLDSVCVADTMVLSNYIEEIVVSAISYHLMNNKDPEYRNGKLVIPCNSLSRALSIFEEGKFSEKDTLKLEAQAVKSEKKEEPAMKREAKSENPVPVKKAEAEISTSVVKAEGENSAPAPKVEVPPDNEFEKRIRPAVIPANEIGVTFSDIGALDETKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRSRVGEHEAMRKIKNEFMTHWDGLMTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREKILKTLLAKEKVDEDLDLKELATMTEGYSGSDLKNLCITAAYRPVRELIQQERLKTLEEKQKGSQGDSPDTEDEVKQKRVIKPRPLNMQDLKEAKNQVAASFASEGAGMNELMQWNELYGEGGSRKQQQLSYFL 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01384 839 Pfam AAA+ lid domain 720 763 IPR041569 -
Arst5g01384 839 ProSitePatterns AAA-protein family signature. 670 689 IPR003960 GO:0005524|GO:0016887
Arst5g01384 839 Gene3D - 526 808 IPR027417 -
Arst5g01384 839 MobiDBLite consensus disorder prediction 763 792 - -
Arst5g01384 839 MobiDBLite consensus disorder prediction 455 478 - -
Arst5g01384 839 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 526 701 - -
Arst5g01384 839 Gene3D - 699 801 - -
Arst5g01384 839 MobiDBLite consensus disorder prediction 455 479 - -
Arst5g01384 839 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 50 838 - -
Arst5g01384 839 SMART AAA_5 563 700 IPR003593 GO:0016887
Arst5g01384 839 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 527 766 IPR027417 -
Arst5g01384 839 Pfam ATPase family associated with various cellular activities (AAA) 567 697 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01384 Arst-Chr5 14923419 14927860 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01384 527 770 Calmodulin-binding Proteins AT3G56690 39.271 2.87e-45 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01384 - - aip:107643102 1316.98