Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01383 ATGGAACAGAAGAGCTTGTTGATATCGGCGCTGAGTGTTGGGGTTGGAGTGGGAGTTGGGATAGGCTTAGCTTCTGGACAAAGCCTTGGTAGCACATGGGGTGCAACTTCTTCTTCTTCTTCAAACTCAAACGCCATCACTCCCATGAAATTGGAGCAGGAAATGCTTAAACTCGTGATTGATGGCGGAGACAGCAACATTACTTTTGATAACTTCCCTTATTATCTCAGTGAGCAGACAAAGGTTTTGTTGATAAGTGCCGCTTATGTTCATTTAAAGCATGCTGATATTTCCAAATATACGCGCAATCTTGCTCCTGCAAGCCGAACTATTCTGCTTTCAGGGCCAGCAGAACTTTACCAGCAGGTTTATGCCAAGGCTTTGGCTCACTACTTTAAGGCCAAGTTGCTTCTCTTGGATTTAACTGACTTTTCGTTGAAGATTCAGAGTAGATATGGTTCTTCTGCAAACAAGGAATCTGCTTCCTTCAAAAGATCTACTTCAGAGTCCACTCTGGAGCGGTTATCTGACATGTTTGGATCATTTTCAATCTTTTCACAGAGGGAAGAGCCTAAGGGCAAAATACAGAGGCAAAGCAGTGCAATGGACCTCCGATCAATGGGGACTGAAGGATCTTGTAATCCTCCTAAGATTCGTCGAAATGTGTCTGCCTCCGCAAATATTAGTAGCCTTGCCTTGCAAAGCAATTCTTCAAATTCAGCTCCTCTGAAGCGCACAACCAGCTGGTCTTTTGATGAGAAGCTTCTTATACTGACCCTTTACAAGGTTCTGCTTTTTGTGTCAAAAACCAATCCCATTGTGCTATATCTGCGAGATGTTGACAAGTTGCTACATAGATCAACAAGGATTTTTAACCTGTTCCAGAAAATGTTGAGTAAATTATCTGGACCAATTCTGATTCTTGGTTCACGAGTTTTGGATGCTGATAACGACTTCCAAGAGGTAGATGACAGACTTAGTTTGCTGTTCCCTTACAATCTGGTAATCAGACCCCCAGAAGATGAATCGCATCTCGTCAGCTGGAAGAGTCGGTTTGAAGAGGACATGAAGATGATACAGGTTCAGGATAACAAGAACCATATCATGGAAGTGCTTGCAGCCAATGATCTTGATTGTGATGACCTGGACTCTGTCTGTGTGGCGGACACAATGGTTCTCAGCAACTATATAGAAGAGATTGTTGTGTCTGCAATTTCATATCATTTAATGAATAACAAAGATCCTGAATACAGAAATGGGAAACTTGTTATTCCATGCAATAGTTTGTCCCGTGCATTGAGTATATTCGAGGAAGGGAAATTCAGTGAAAAAGATACGTTAAAATTAGAAGCTCAGGCAGTAAAATCTGAGAAAAAGGAAGAACCTGCTATGAAACGAGAAGCAAAGTCTGAAAATCCTGTTCCTGTTAAGAAGGCTGAAGCAGAAATATCAACTTCAGTGGTAAAGGCTGAGGGTGAAAACTCAGCTCCAGCTCCCAAAGTTGAAGTTCCTCCTGATAATGAATTCGAGAAGCGAATAAGACCTGCGGTAATACCAGCAAATGAAATTGGTGTGACATTCTCAGATATTGGTGCCTTAGATGAGACCAAGGAATCCCTTCAAGAACTAGTAATGCTTCCTCTTCGAAGGCCGGATCTCTTCAAAGGAGGCCTTCTAAAGCCCTGTAGAGGAATATTGCTGTTTGGTCCTCCTGGCACTGGAAAGACAATGCTGGCAAAGGCCATCGCGAACGAGGCCGGGGCAAGTTTCATAAACGTGTCCATGTCTACCATCACTTCCAAATGGTTTGGTGAAGATGAGAAGAATGTTCGCGCTTTATTCACGCTGGCAGCCAAGGTCTCGCCAACAATCATATTTGTTGATGAGGTTGACAGCATGCTTGGGCAACGGAGCAGAGTTGGGGAGCATGAAGCCATGAGGAAAATCAAGAATGAGTTTATGACTCACTGGGATGGACTAATGACAAAACCGGGGGAGCGCATCCTTGTTCTTGCTGCAACCAATAGGCCCTTTGACTTGGATGAAGCAATTATTAGGAGATTTGAAAGAAGAATTATGGTAGGGCTACCATCTGTGGAGAATAGGGAAAAAATTTTGAAGACACTTCTGGCAAAAGAGAAGGTGGACGAGGATCTTGATTTGAAGGAACTTGCAACTATGACGGAAGGATACAGTGGCAGTGACTTGAAGAACTTGTGCATAACTGCTGCTTATAGGCCTGTTAGAGAGTTGATTCAACAAGAGAGACTAAAGACTCTGGAGGAAAAGCAGAAAGGTAGCCAAGGAGATAGTCCGGATACAGAAGATGAAGTTAAGCAGAAAAGGGTTATTAAACCTAGGCCCTTGAATATGCAGGACTTGAAAGAGGCAAAGAATCAAGTAGCTGCAAGCTTTG 2416 0.4309 MEQKSLLISALSVGVGVGVGIGLASGQSLGSTWGATSSSSSNSNAITPMKLEQEMLKLVIDGGDSNITFDNFPYYLSEQTKVLLISAAYVHLKHADISKYTRNLAPASRTILLSGPAELYQQVYAKALAHYFKAKLLLLDLTDFSLKIQSRYGSSANKESASFKRSTSESTLERLSDMFGSFSIFSQREEPKGKIQRQSSAMDLRSMGTEGSCNPPKIRRNVSASANISSLALQSNSSNSAPLKRTTSWSFDEKLLILTLYKVLLFVSKTNPIVLYLRDVDKLLHRSTRIFNLFQKMLSKLSGPILILGSRVLDADNDFQEVDDRLSLLFPYNLVIRPPEDESHLVSWKSRFEEDMKMIQVQDNKNHIMEVLAANDLDCDDLDSVCVADTMVLSNYIEEIVVSAISYHLMNNKDPEYRNGKLVIPCNSLSRALSIFEEGKFSEKDTLKLEAQAVKSEKKEEPAMKREAKSENPVPVKKAEAEISTSVVKAEGENSAPAPKVEVPPDNEFEKRIRPAVIPANEIGVTFSDIGALDETKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRSRVGEHEAMRKIKNEFMTHWDGLMTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREKILKTLLAKEKVDEDLDLKELATMTEGYSGSDLKNLCITAAYRPVRELIQQERLKTLEEKQKGSQGDSPDTEDEVKQKRVIKPRPLNMQDLKEAKNQVAASFASEGAGMNELMQWNELYGEGGSRKQQQLSYFL 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01383 837 MobiDBLite consensus disorder prediction 453 477 - -
Arst5g01383 837 Pfam AAA+ lid domain 718 761 IPR041569 -
Arst5g01383 837 ProSitePatterns AAA-protein family signature. 668 687 IPR003960 GO:0005524|GO:0016887
Arst5g01383 837 Gene3D - 697 799 - -
Arst5g01383 837 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 50 836 - -
Arst5g01383 837 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 524 699 - -
Arst5g01383 837 MobiDBLite consensus disorder prediction 453 476 - -
Arst5g01383 837 MobiDBLite consensus disorder prediction 761 790 - -
Arst5g01383 837 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 525 764 IPR027417 -
Arst5g01383 837 MobiDBLite consensus disorder prediction 195 216 - -
Arst5g01383 837 Gene3D - 524 806 IPR027417 -
Arst5g01383 837 Pfam ATPase family associated with various cellular activities (AAA) 565 695 IPR003959 GO:0005524|GO:0016887
Arst5g01383 837 SMART AAA_5 561 698 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01383 Arst-Chr5 14923419 14927861 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01383 525 768 Calmodulin-binding Proteins AT3G56690 39.271 2.47e-45 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01383 - - aip:107643102 1308.89