Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01355 ATGGCTCGAGCAGTGTGCGAAGAGAAATCGAGGGAGATGGTGTCATCATCAGGTGGTTTCTGTTACTCGGGGACGACGATGGAAGGGTTGGTGGGGGACCCTGCAGACATGTTCAACAACCTCACCAGTGGCATGGACATGGTAGGGTTTTCGAAGAATGTTGATAGCAACAACCCTCACATGTGGAAGGCTTTGTTTGGGAAACAAGGGCCTTCCAGTAGGAGCATCAACAACGATTCTTCTTCAGCCTCCTTCTACCAACAGCAACAGGTTGATGATGATTCATCGTGGCAGGAGAACAGGTTGGTGGTTGACGATTCATCTCTGAGGTGTGTGTTCCCATGTGAAGGAAACGAGAGGCCAAGTCAAGGTCTCTCGCTCTCTCTAAGTTCAACCAATCCCTCATCCATTGGCTTGCAATCTTTTGAGCTCAGACAAACCACTCACCCTCAGTCTCAGCCTTATTATGCATATCAAAATTTTGCTAATAATAATAATAAAGCTGCAGCTTCCTCCTCATCTACTAGTGCTTATCAAGGACACTTGATGCTCAAGAACTCCAAGTACTTAGTTCCAGCACAGGATCTTCTCAACGAGTTTTGTAGCCTGGCCATAAAGCACAAGTCCAACAACAACAACCACCAGCACTGGGAAGATCACGATTCCTCAAAGAAGCCTTCTCCTACCTCTATTGAATTCCTGGAGCTGCAAAAGCGAAAGACCAAACTGCTTTCCATGCTCGAAGAGGTTGACAGGAGATACAAGAACTACCGGATTCAGATGAAGGCGGTGGTGTCTTCCTTTGAGGCGGTGGCTGGGAACGGTGCTGCCACGGTTTACACGGCTTTGGCACAGAAAGCCATGTCTAAATATTTCAGGAACTTGAAGGATGCGATAATGGGGCAGATTCAGGCGACAAGAAAGGCCATGGGAGAGAAAGATCCAGTTGCACCAGGCACCACCAAGGGCGAAACCCCGAGGCTGAAGATCATTGACCAAGCTTTGAGGCAGCAAAGGGCATTCCAGCAAATGAGCATGATGGAAACTCATCCATGGAGACCTCAGCGTGGCCTTCCCGAGCGCTCCGTTTCTGTTCTTCGTGCTTGGCTCTTTGAGCATTTCCTCCATCCTTACCCAAGCGACGTTGATAAACATATTCTAGCCCGCCAAACTGGCCTATCAAGAAGCCAGGTTTCAAACTGGTTTATCAACGCAAGGGTTCGTCTGTGGAAGCCAATGGTGGAGGAAATGTACATGGAGGAATTGAAGGAACAAGAAAATATGATGGCTTCTTCGGAGGGTGCTGACGACCCGGACCTCCACCTGCCATCATCACGATCGGAGGATCAGAAGCCAAGCGTAGTGGTTGGAATGGAGTCCGATCAGTGTGCGTCATCATCCATGCTCAACAACATAAAAAACGACCCAAAGAGCAGCCATAATAATCCGGAAGAAGAATGCTTGGGGCGAGTGATGGACACGTTTGGATCGGTGGAGCTTGATTTCTCTTCATACACGCAGCAGCAGCAGCAGCAACAGCAGGGTTTCAATGGGGTTTCTTTAACTCTAGGGTTACAACAGCACGGTGGAAGCGGGGTGAGCCTGGCGTTCCCTCCTCCTCCGGTGAGCAGTCATCATAGCTCGCTCTTCTACGCAACAACCAGGGATCAGATAATGGACAGCTGTCCACCCTCATCGTCATCTATAGTTCATCACTACTCTCTTGTTGATGGCGAACCACAAAATCTTCCTTACAGGAATCTCATGGGTGCACAGTTGCTTCATGACCTCGCTGGCTAA 1800 0.4917 MARAVCEEKSREMVSSSGGFCYSGTTMEGLVGDPADMFNNLTSGMDMVGFSKNVDSNNPHMWKALFGKQGPSSRSINNDSSSASFYQQQQVDDDSSWQENRLVVDDSSLRCVFPCEGNERPSQGLSLSLSSTNPSSIGLQSFELRQTTHPQSQPYYAYQNFANNNNKAAASSSSTSAYQGHLMLKNSKYLVPAQDLLNEFCSLAIKHKSNNNNHQHWEDHDSSKKPSPTSIEFLELQKRKTKLLSMLEEVDRRYKNYRIQMKAVVSSFEAVAGNGAATVYTALAQKAMSKYFRNLKDAIMGQIQATRKAMGEKDPVAPGTTKGETPRLKIIDQALRQQRAFQQMSMMETHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYMEELKEQENMMASSEGADDPDLHLPSSRSEDQKPSVVVGMESDQCASSSMLNNIKNDPKSSHNNPEEECLGRVMDTFGSVELDFSSYTQQQQQQQQGFNGVSLTLGLQQHGGSGVSLAFPPPPVSSHHSSLFYATTRDQIMDSCPPSSSSIVHHYSLVDGEPQNLPYRNLMGAQLLHDLAG 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01355 599 MobiDBLite consensus disorder prediction 70 97 - -
Arst5g01355 599 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 91 438 - -
Arst5g01355 599 MobiDBLite consensus disorder prediction 64 97 - -
Arst5g01355 599 ProSiteProfiles 'Homeobox' domain profile. 349 412 IPR001356 GO:0003677
Arst5g01355 599 Gene3D - 355 417 - -
Arst5g01355 599 Pfam Associated with HOX 183 300 IPR006563 -
Arst5g01355 599 SMART HOX_1 352 416 IPR001356 GO:0003677
Arst5g01355 599 CDD homeodomain 352 413 IPR001356 GO:0003677
Arst5g01355 599 Pfam Homeobox KN domain 369 408 IPR008422 GO:0003677|GO:0006355
Arst5g01355 599 SMART prehox3 178 301 IPR006563 -
Arst5g01355 599 FunFam BEL1-like homeodomain protein 4 355 417 - -
Arst5g01355 599 SUPERFAMILY Homeodomain-like 353 419 IPR009057 -
Arst5g01355 599 MobiDBLite consensus disorder prediction 425 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01355 Arst-Chr5 14485162 14489470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01355 99 598 Homeobox Transcription Factor Family AT5G41410 45.664 1.02e-128 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Arst5g01355 POX 2.6e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01355 - - lang:109331282 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01355 5 14485162 14489470 Arst5g01355 5 14485162 14489470 ECH
Arst5g01355 5 14485162 14489470 Arst3g03650 3 101221315 101224189 PCT
Arst1g02372 1 70755900 70758879 Arst5g01355 5 14485162 14489470 PCT