Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01353 ATGGGATTTCCGGTGGGATACACAGAGCTTCTCTTACCCAAGCTCTTCCTCCAAATACTCTCCCTCCTCTCTTTCCTCAGAAAACTCATCTCCGCTCTCTTCCATTACCTCGGCCTCCAACACTTCTTGGAACCCGATACCATCAACCACCACCCTCTCCACCCCCAATTCCAGTCCGTCTCCGCACTCCTCATCAGGGAAATCCTGCCGGTGGTCAGGTTTCAGGAGGTGGCGGACCCGGCGGAGGAGAGCTGCGCGGTGTGCTTGTACGAGTTCCAAGGGGACGACGAGATCCGACGCCTCAGAAACTGCCGGCACATATTCCACCGGAGATGCCTTGACCGTTGGATGGGGTACGAACAGAGGACGTGCCCGTTGTGCCGGACACCGCTCATACCGTACGATATGCAAGCTTGCTTCAATCAGAGCCTCTGGGATGCTTCTGCCATCCCTGAATTCTCCTAG 465 0.5634 MGFPVGYTELLLPKLFLQILSLLSFLRKLISALFHYLGLQHFLEPDTINHHPLHPQFQSVSALLIREILPVVRFQEVADPAEESCAVCLYEFQGDDEIRRLRNCRHIFHRRCLDRWMGYEQRTCPLCRTPLIPYDMQACFNQSLWDASAIPEFS 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01353 154 CDD RING-H2_RHA1-like 82 131 - -
Arst5g01353 154 Pfam Ring finger domain 84 128 IPR001841 -
Arst5g01353 154 SMART ring_2 85 127 IPR001841 -
Arst5g01353 154 PANTHER RING ZINC FINGER PROTEIN-RELATED 20 145 - -
Arst5g01353 154 SUPERFAMILY RING/U-box 69 134 - -
Arst5g01353 154 FunFam RING-H2 finger protein ATL73 65 135 - -
Arst5g01353 154 ProSiteProfiles Zinc finger RING-type profile. 85 128 IPR001841 -
Arst5g01353 154 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 134 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01353 Arst-Chr5 14429759 14431102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01353 1 149 C3H Transcription Factor Family AT1G63840 57.143 9.45e-58 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01353 K16281 - fve:101313016 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01353 5 14429759 14431102 Arst5g01353 5 14429759 14431102 ECH
Arst5g01353 5 14429759 14431102 Arst3g03660 3 101383430 101384114 PCT