Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01351 ATGTATTCTGATATGCATGGTTTTGATATTTTGTCACACATGTTCAATGAAGAAATCCCAGACCTTATTCTTTTCTCTGATGATCCTCTTCCTCTCTTCACAGCTCAAGAAAACATACTTGATTCTCTTGATCCTTTATCCCTTTCATGCATCAATTTCTCAGAGTCCCAAATCGTGGCGGATCATTGTTCCAACAATCATCAGCACCATCTAAGTCTTCCTCACAGTTACCTGCAGAGGAGCTCCAGTTGCAAATCGTTTGATAGAAAACCAGTTTTTCCACCATGTGAAGCTCACAACGACACTTTGATGGATTCCCCAACTTCTGAGTGGGAAAACGATTTCTTCAAAGGACAAATAAGGAGGGTCTTCAGTGCAGGAGACTTGCAGAACATGCATGCAACTCAAACACTTCAGACGGATGAACCGTACTTGAAGGTGGGGCGTTACAGTCCCCAAGAAAGGAAAGAGAAAATCTCAAAGTACAGGGCCAAGAGAAGCCAGAGGAAGTTCAACAAGACTATCAAGTATGCATGCCGAAAGACACTAGCCGACAATCGAGTCCGCATACGTGGCAGATTCGCACGCAACGACGATACCAGCGTGATTCCAAAAGCCCCATGTTCAACTTCAAATACACAGCAAGACCAAGATGAATTCTGGTGTAGATTGAATTGA 678 0.4336 MYSDMHGFDILSHMFNEEIPDLILFSDDPLPLFTAQENILDSLDPLSLSCINFSESQIVADHCSNNHQHHLSLPHSYLQRSSSCKSFDRKPVFPPCEAHNDTLMDSPTSEWENDFFKGQIRRVFSAGDLQNMHATQTLQTDEPYLKVGRYSPQERKEKISKYRAKRSQRKFNKTIKYACRKTLADNRVRIRGRFARNDDTSVIPKAPCSTSNTQQDQDEFWCRLN 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01351 225 ProSiteProfiles CCT domain profile. 155 197 IPR010402 GO:0005515
Arst5g01351 225 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 68 210 IPR045281 GO:0009909
Arst5g01351 225 Pfam CCT motif 155 197 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01351 Arst-Chr5 14395388 14397202 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01351 125 200 C2C2-CO-like Transcription Factor Family AT5G15850 38.158 1.34e-11 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst5g01351 CCT 1.3e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01351 - - ahf:112749670 444.891