Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01350 ATGTATTCTGATATGCATGGTTTTGATATTTTGTCACACATGTTCAATGAAGAAATCCCAGACCTTATTCTTTTCTCTGATGATCCTCTTCCTCTCTTCACAGCTCAAGAAAACATACTTGATTCTCTTGATCCTTTATCCCTTTCATGCATCAATTTCTCAGAGTCCCAAATCGTGGCGGATCATTGTTCCAACAATCATCAGCACCATCTAAGTCTTCCTCACAGTTACCTGCAGAGGAGCTCCAGTTGCAAATCGTTTGATAGAAAACCAGTTTTTCCACCATGTGAAGCTCACAACGACACTTTGATGGATTCCCCAACTTCTGAGTGGGAAAACGATTTCTTCAAAGGACAAATAAGGAGGGTCTTCAGTGCAGGAGACTTGCAGAACATGCATGCAACTCAAACACTTCAGACGGATGAACCGTACTTGAAGGTGGGGCGTTACAGTCCCCAAGAAAGGAAAGAGAAAATCTCAAAGTACAGGGCCAAGAGAAGCCAGAGGAAGTTCAACAAGACTATCAAGTATGCATGCCGAAAGACACTAGCCGACAATCGAGTCCGCATACGTGGCAGATTCGCACGCAACGACGATACCAGCGTGATTCCAAAAGCCCCATGTTCAACTTCAAATACACAGCAAGACCAAGATGAATTCTGGATTGAATTGATTGAAGCGTTGAATGAGTAG 693 0.4329 MYSDMHGFDILSHMFNEEIPDLILFSDDPLPLFTAQENILDSLDPLSLSCINFSESQIVADHCSNNHQHHLSLPHSYLQRSSSCKSFDRKPVFPPCEAHNDTLMDSPTSEWENDFFKGQIRRVFSAGDLQNMHATQTLQTDEPYLKVGRYSPQERKEKISKYRAKRSQRKFNKTIKYACRKTLADNRVRIRGRFARNDDTSVIPKAPCSTSNTQQDQDEFWIELIEALNE 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01350 230 ProSiteProfiles CCT domain profile. 155 197 IPR010402 GO:0005515
Arst5g01350 230 Pfam CCT motif 155 197 IPR010402 GO:0005515
Arst5g01350 230 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 68 210 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01350 Arst-Chr5 14395388 14397202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01350 125 200 C2C2-CO-like Transcription Factor Family AT5G15850 38.158 1.22e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst5g01350 CCT 1.3e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01350 - - ahf:112749670 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01350 5 14395388 14397202 Arst5g01350 5 14395388 14397202 ECH
Arst5g01350 5 14395388 14397202 Arst3g03661 3 101392144 101394016 PCT