Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01343 ATGGAGAGGGAAGAAGATGTGAAAGTTGGAGCAAACAAATTCTCAGAGAGGCATGCACTGGGAACAGGAGCAGAGAGTGAGAAGCCGGAATACAAGGAGGCACCACCAGCACCATTGTTTGAGCCTGGTGAGCTCAAGTCATGGTCCTTCTACAGAGCCGGAATAGCTGAGTTTGTGGCCACATTCTTGTTCCTCTATATCACCATCTTAACCGTCATGGGAGTGAACAGATCTCCCTCCAAGTGCTCCTCCGTTGGCATTCAGGGCATTGCTTGGTCTTTCGGCGGCATGATCTTCGCCCTTGTTTACTGCACTGCTGGAATCTCCGGCGGACACATAAACCCGGCGGTGACCTTCGGGTTGTTTCTGGCAAGGAAGCTTTCACTGACAAGGGCAGTGTTCTACATGGTGATGCAGTGTCTTGGAGCCATTTGCGGCGCTGGTGTGGTGAAGGGGTTCGAAGGGAATGCGAGGTTTGAGATGTATAAAGGTGGAGCTAATATGGTTAACCATGGATACAGCAAAGGTGATGGGCTTGGTGCTGAGATTGTTGGTACCTTTGTTCTTGTTTACACTGTATTCTCTGCTACTGATGCTAAAAGAAACGCAAGAGACTCACATGTTCCCATTTTGGCGGCAACCATTCCTATCACTGGAACTGGGATTAACCCAGCTAGGAGCCTTGGTGCTGCCATCATCTTCAACAGAGACCATGCATGGAATGATCAATGGATTTTCTGGGTTGGGCCTTTCGTTGGAGCTGCTCTTGCTGCCGTGTACCACCAGATAGTCATCCGAGCTATTCCTTTCAAGTCAAGGCCTTAA 825 0.4958 MEREEDVKVGANKFSERHALGTGAESEKPEYKEAPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVNRSPSKCSSVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGNARFEMYKGGANMVNHGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAATIPITGTGINPARSLGAAIIFNRDHAWNDQWIFWVGPFVGAALAAVYHQIVIRAIPFKSRP 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01343 274 FunFam Probable aquaporin PIP1-2 37 274 - -
Arst5g01343 274 SUPERFAMILY Aquaporin-like 44 266 IPR023271 -
Arst5g01343 274 Gene3D Glycerol uptake facilitator protein. 37 272 IPR023271 -
Arst5g01343 274 ProSitePatterns MIP family signature. 112 120 IPR022357 -
Arst5g01343 274 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 12 269 IPR034294 -
Arst5g01343 274 Pfam Major intrinsic protein 44 261 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst5g01343 274 MobiDBLite consensus disorder prediction 1 33 - -
Arst5g01343 274 CDD MIP 52 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst5g01343 274 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst5g01343 274 PRINTS Major intrinsic protein family signature 244 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst5g01343 274 PRINTS Major intrinsic protein family signature 94 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst5g01343 274 PRINTS Major intrinsic protein family signature 181 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst5g01343 274 PRINTS Major intrinsic protein family signature 131 150 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst5g01343 274 NCBIfam MIP family channel protein 56 260 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01343 Arst-Chr5 14311557 14313009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01343 3 273 Major Intrinsic Protein MIP AT4G23400 78.873 1.30e-157 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01343 K09872 - gmx:100796833 504.597