Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01329 ATGGATGGGCGAGAAGCAATGTCATTCTCTGGCGGCCCTGCCTCATTCTACATACATAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGTTGGTGGTTCTCGAACACCAACACAGCCACAACCCGGAGGCTTCCAAGGACCTCCTGGGTTCCGGGCTGTCTCAAACGTGAGAGGTGCTGGTGGCCCTGGTCCTGCTGCTTCTGCATTCTCACCAGAGCCTCAGCATCCTAATTTTGGTCATGGAATCAGCATAGGTTCCTCCTCCCCTGGTGGTGGTGGTGGTGGTGGTGGTGGTAGTGGTGCACCTCCTCCATCTTCAGGGGAGCCTGTAAAGAAGAAAAGAGGGAGGCCAAGAAAGTATGGTCCTGGTGGACCTGTTTCTTTGAGGCTCTCTGCCACTGCTAATTCATCTCCTGGCTCCGGTACTCCCTTGGAAAAGAAGCGGCGCGGACGCCCCCCTGGAAGTGGAAGGAAGCAACAGCTAGCTTCTCTAGGTGAATGGATGAACAGTTCTGCAGGGATGGCCTTCTCACCTCATGTTATAAGTGTTGAACCTGGGGAGGACATTGTAGCCAAGTTATTGTCATTTGCACAGCAGAGACCAAGGGCTGTATGCATAATGTCTGGTACTGGGATAGTTTCTTCGGTCACTATGCGTCAACCTGCTTCTAATACTGTCAGTGTTACTTATGAGGGACGATTTCAAATTTTATGCTTGTCTGGTTCTTATTTGGTTGCGGACGATGGTGGAGCTCGTAGTAGAACAGGCGGCATCAGTGTTTCCCTTTCTAGTCCTGAGGGTCATGTTATTGGTGGTGGCGTTGCTGTGCTTATTGCCGCAACCCCAGTGCAGGTGGTAGTATGCAGTTTTGTATATGGTGGCAGCTCCAAGGCAAAGCCTAAGCAAGTGACAAGCACAAAAGATAGTGGTTCAGAGCCTCAAAGTAGCGACAAGTTAGCTTCTCCGGCAAGTGCACCTCCTCCTAATCAAAACTACAACTCATCTTCATCTGCGGTAGCCATTTGGCCTGGTTCGCAGCCGGCTGATCTTAAAAGTGCACATCCACACACTGGTATTGACCTGACACGTGGATGA 1098 0.5146 MDGREAMSFSGGPASFYIHRGGGGGGGGGGVGGSRTPTQPQPGGFQGPPGFRAVSNVRGAGGPGPAASAFSPEPQHPNFGHGISIGSSSPGGGGGGGGGSGAPPPSSGEPVKKKRGRPRKYGPGGPVSLRLSATANSSPGSGTPLEKKRRGRPPGSGRKQQLASLGEWMNSSAGMAFSPHVISVEPGEDIVAKLLSFAQQRPRAVCIMSGTGIVSSVTMRQPASNTVSVTYEGRFQILCLSGSYLVADDGGARSRTGGISVSLSSPEGHVIGGGVAVLIAATPVQVVVCSFVYGGSSKAKPKQVTSTKDSGSEPQSSDKLASPASAPPPNQNYNSSSSAVAIWPGSQPADLKSAHPHTGIDLTRG 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01329 365 ProSiteProfiles PPC domain profile profile. 172 313 IPR005175 -
Arst5g01329 365 Gene3D - 179 309 - -
Arst5g01329 365 MobiDBLite consensus disorder prediction 1 162 - -
Arst5g01329 365 Pfam Plants and Prokaryotes Conserved (PCC) domain 179 292 IPR005175 -
Arst5g01329 365 CDD DUF296 179 291 IPR005175 -
Arst5g01329 365 MobiDBLite consensus disorder prediction 299 343 - -
Arst5g01329 365 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 73 332 IPR039605 GO:0003680
Arst5g01329 365 SUPERFAMILY AF0104/ALDC/Ptd012-like 176 293 - -
Arst5g01329 365 MobiDBLite consensus disorder prediction 296 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01329 Arst-Chr5 14246373 14249558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01329 1 365 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 49.745 6.35e-97 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01329 - - aip:107643074 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01329 5 14246373 14249558 Arst3g03717 3 104289468 104292169 PCT