Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01326 ATGATGGGTAGAAAGTTTGAGAGTTGGGACTGCATTAACAGCTTCAAGTGCTGTGGGAATCTGTCTCCTCAGCCACACTACCCCTCCATGACGACATATCCTAAAGGGATGTCGCCGGAAGGATCGGAGGCGAAAGCGGTGTTGAGTGTGATGGGAATGACATGTGCTGCTTGCGCTGGATCCGTGGAGAAATCTATCAAACGCTTACCTGGGATTCTAGAAGCTGCCGTTGATGTATTGAATGATAAAGCTCAGGTTCTATATTATCCATCTATGGTTAATGTGGAGAGAATATGTGAGGCCATTGAAGATGCAGGATTTGAAGCAAAGCTTATTGAAGAAGAATCAAATGATGAACACCCTTTTGAGATATGTAGAATACACATAAGGGGCATGACTTGCACTTCTTGCTCTTCAACTCTTGAATCAGCTCTTCAATCCCTTAGAGGTGTGCACAATGCTCAAGTTGCATTGGCAACTGAAGAAGCAGAAATTCACTATGATCCTAACATTGTAACCTATGATCAACTCAAAGAGGCTATAGAGGACACTGGATTTGAATCCATATTAATAAGCACTGGAGAGCACATAAGCAAAATACATCTTAAAGTTGATGGAATTAAGAATGAACAATCAATAAGTGCTATTCAGAAATCTCTTCAATCTCTTCCTGGAGTTGTAAACATTGACACATATATTGACATCAACAAAATTTCTATAGCTTATAAACCTTACATGACAGGGCCTAGAACCTTCATTCAAGTCATAGAATCTGCAGGTTCTGGATGTTTCAAAGCGGAGATATTTCCGGCCGAAGAAGGAGGGAGGGAGACACATAGGAAGCAGGAGATTAAGCAGTACTTCAAATTCTTCATTTGGAGTTTGGTTTTCACCATTCCTGTGTTTCTAACATCAATGGTTCTTATGTATGTACCTGGAATTAAACATGTTCTTGATATCAAAGTTGTGAATATGCTTAAAGTTGGACAGTTATTGAGATGGGAATTGGCTACACCAGTGCAATTCATCATAGGAAGGAGATTCTACATTGGATCATATAGATCATTGAGAAAAGGCTCTGCCAATATGGATGTATTGATTGCATTGGGAACCAATGCAGCATACTTGTATTCTGTTTATGTGGTGGCAAGAGCTGCATTCTCAAGAGATTTCAAAGGCAATGATTTCTTTGAGACAAGTTCTATGCTGATTTCGTTTATTCTGTTAGGGAAGTATTTAGAGGTGTTGGCCAAAGGGAAAACATCTCAGGCCATTGCTAAGCTTATTGACTTGACACCTGATACAGCAATCCTGTTGAATCAAGATGGTGAAGAACAGATTGATAGCAGGTTGGTACAAAAGAATGATGTGATTAAAGTTGTTCCTGGCGCGAAAGTTGCTTCGGATGGAATTGTTATATGGGGCCAGAGCCATGTCAATGAGAGCATGATAACCGGAGAGGCAAGGCCGGTGGCAAAAAGGAAGGGTGACATGGTGATTGGAGGCACAGTGAATCAGAATGGAGTCTTGCATGTTAAGGTAACAAGGGTTGGATCAGAGAGTGCCCTGTCTCAGATTGTTCGACTAGTCGAGTCTGCTCAGATGGCGAAAGCTCCAGTTCAGAAACTTGCTGATCACATTTCTAAGTACTTTGTTCCTCTTGTCATTGTGCTTTCTTTTTCAACTTGGATTGCTTGGTATTTAGCAGGAAAGTTGCATGCATACCCAAAATCATGGATTCCATCTTCCATGAACAGCTTTGAGCTTGCCCTTCAGTTCGGGATATCGGTAATGGTCATTGCATGCCCTTGTGCTCTAGGCCTAGCCACTCCTACAGCTGTTATGGTTGGTACTGGAGTTGGTGCAACTCAAGGTGTGTTAATCAAAGGTGGACAAGCTCTAGAAAGTGCACATAAGGTGAATTGCATTGTGTTTGACAAGACAGGTACTCTCACAATTGGGAAGCCAGTGATTGTAACTACAAAGCTCTTCAAGAACATGTCAGTTCAAGATTTCTATGAACTTGTTGCAGCAGCAGAGGTGAATAGTGAACATCCCATAGCCAGGGCTATTGTTGAGCATGCCAAGAAGATCATCACAGAAGATGAACAGAATCATACCTGGCCAGAAGTGCGCGACTTTGTTTCGATATCAGGCCATGGAGTTAAGGCCATTGTTCAAAACAAGGAGATATTGGCTGGGAACAAAAAACTGATGATGGATCACAACATAGCCATTTCAGTGGATGCTGAAGAAGTTCTAGCAGAAGCTGAGAGATTAGCTCAAACTGGGATTTTAGTATCCTTAGATGGAGAAATAGCTGGAGTCTTGGCTGTATCTGATCCATTGAAACCTGATGCAAAGGAAGTTATCTCAATTCTCAAGTCCATGAAGATCAAAAGCATCATGGTCACAGGTGATAACTGGGGTACTGCTAATTCCATAGCTAGACAAGCTGGTATTGAAACTGTTATGGCAGAAGCCCAACCTCACACTAAAGCTACTCAAGTAAAAGATTTGCAGAATTCTGGCTACACTGTGGCAATGGTGGGAGATGGAATCAATGACTCGCCAGCACTTGTCTCGGCCGATGTAGGAATGGCGATTGGTGCTGGCACAGACATAGCTATTGAGGCAGCAGACATAGTTTTGATGAGAAGCAACTTGGAGGACATAGTAATAGCCATAGACCTTGCAAAGAAAACCTTCAACCGAATTCGCCTCAACTACATTTGGGCACTTGGTTACAACCTCTTATCAATCCCAATTGCTGCAGGCATACTTTACCCTTCCACTAGATTCAGATTGCCACCATGGATTGCTGGGGCTGCAATGGCTGCCTCTTCTATCAGTGTTGTTTGCTCCTCCCTCTTGTTGAAGAATTACAAGAGACCAAACAAGCTAAACAAATTGGACTTAAATGCTATAAAGATTGAGTGA 2940 0.4214 MMGRKFESWDCINSFKCCGNLSPQPHYPSMTTYPKGMSPEGSEAKAVLSVMGMTCAACAGSVEKSIKRLPGILEAAVDVLNDKAQVLYYPSMVNVERICEAIEDAGFEAKLIEEESNDEHPFEICRIHIRGMTCTSCSSTLESALQSLRGVHNAQVALATEEAEIHYDPNIVTYDQLKEAIEDTGFESILISTGEHISKIHLKVDGIKNEQSISAIQKSLQSLPGVVNIDTYIDINKISIAYKPYMTGPRTFIQVIESAGSGCFKAEIFPAEEGGRETHRKQEIKQYFKFFIWSLVFTIPVFLTSMVLMYVPGIKHVLDIKVVNMLKVGQLLRWELATPVQFIIGRRFYIGSYRSLRKGSANMDVLIALGTNAAYLYSVYVVARAAFSRDFKGNDFFETSSMLISFILLGKYLEVLAKGKTSQAIAKLIDLTPDTAILLNQDGEEQIDSRLVQKNDVIKVVPGAKVASDGIVIWGQSHVNESMITGEARPVAKRKGDMVIGGTVNQNGVLHVKVTRVGSESALSQIVRLVESAQMAKAPVQKLADHISKYFVPLVIVLSFSTWIAWYLAGKLHAYPKSWIPSSMNSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGATQGVLIKGGQALESAHKVNCIVFDKTGTLTIGKPVIVTTKLFKNMSVQDFYELVAAAEVNSEHPIARAIVEHAKKIITEDEQNHTWPEVRDFVSISGHGVKAIVQNKEILAGNKKLMMDHNIAISVDAEEVLAEAERLAQTGILVSLDGEIAGVLAVSDPLKPDAKEVISILKSMKIKSIMVTGDNWGTANSIARQAGIETVMAEAQPHTKATQVKDLQNSGYTVAMVGDGINDSPALVSADVGMAIGAGTDIAIEAADIVLMRSNLEDIVIAIDLAKKTFNRIRLNYIWALGYNLLSIPIAAGILYPSTRFRLPPWIAGAAMAASSISVVCSSLLLKNYKRPNKLNKLDLNAIKIE 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01326 979 Gene3D - 731 781 IPR023299 GO:0000166
Arst5g01326 979 Gene3D - 651 730 IPR023299 GO:0000166
Arst5g01326 979 NCBIfam copper ion binding protein 127 187 IPR006122 GO:0005507
Arst5g01326 979 NCBIfam copper ion binding protein 46 109 IPR006122 GO:0005507
Arst5g01326 979 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 5 974 - -
Arst5g01326 979 FunFam Copper-transporting ATPase 1, putative 418 534 - -
Arst5g01326 979 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 5 974 - -
Arst5g01326 979 CDD HMA 129 187 IPR006121 GO:0046872
Arst5g01326 979 SUPERFAMILY HAD-like 643 956 IPR036412 -
Arst5g01326 979 SUPERFAMILY HMA, heavy metal-associated domain 123 195 IPR036163 GO:0046872
Arst5g01326 979 Gene3D - 123 191 - -
Arst5g01326 979 SFLD p-type atpase 626 901 IPR044492 -
Arst5g01326 979 SUPERFAMILY Calcium ATPase, transduction domain A 433 530 IPR008250 -
Arst5g01326 979 SFLD p-type atpase 626 901 IPR044492 -
Arst5g01326 979 Pfam E1-E2 ATPase 431 622 - -
Arst5g01326 979 SUPERFAMILY HMA, heavy metal-associated domain 41 115 IPR036163 GO:0046872
Arst5g01326 979 CDD P-type_ATPase_Cu-like 291 961 - -
Arst5g01326 979 ProSiteProfiles Heavy-metal-associated domain profile. 123 189 IPR006121 GO:0046872
Arst5g01326 979 PRINTS P-type cation-transporting ATPase superfamily signature 850 869 - -
Arst5g01326 979 PRINTS P-type cation-transporting ATPase superfamily signature 797 807 - -
Arst5g01326 979 PRINTS P-type cation-transporting ATPase superfamily signature 873 885 - -
Arst5g01326 979 PRINTS P-type cation-transporting ATPase superfamily signature 644 658 - -
Arst5g01326 979 PRINTS P-type cation-transporting ATPase superfamily signature 480 494 - -
Arst5g01326 979 PRINTS P-type cation-transporting ATPase superfamily signature 775 786 - -
Arst5g01326 979 FunFam ATPase copper transporting beta 119 193 - -
Arst5g01326 979 CDD HMA 47 110 IPR006121 GO:0046872
Arst5g01326 979 Pfam Heavy-metal-associated domain 127 187 IPR006121 GO:0046872
Arst5g01326 979 Pfam Heavy-metal-associated domain 48 108 IPR006121 GO:0046872
Arst5g01326 979 Gene3D - 198 260 - -
Arst5g01326 979 SFLD C1.7: P-type atpase like 626 901 - -
Arst5g01326 979 SFLD C1.7: P-type atpase like 626 901 - -
Arst5g01326 979 ProSitePatterns Heavy-metal-associated domain. 129 158 IPR017969 GO:0046872
Arst5g01326 979 NCBIfam HAD-IC family P-type ATPase 403 929 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst5g01326 979 SUPERFAMILY Calcium ATPase, transmembrane domain M 400 637 IPR023298 -
Arst5g01326 979 PRINTS Copper-transporting ATPase 1 signature 147 168 - -
Arst5g01326 979 PRINTS Copper-transporting ATPase 1 signature 45 70 - -
Arst5g01326 979 PRINTS Copper-transporting ATPase 1 signature 71 94 - -
Arst5g01326 979 SUPERFAMILY HMA, heavy metal-associated domain 194 264 IPR036163 GO:0046872
Arst5g01326 979 FunFam Probable copper-transporting ATPase HMA5 772 907 - -
Arst5g01326 979 ProSiteProfiles Heavy-metal-associated domain profile. 44 110 IPR006121 GO:0046872
Arst5g01326 979 NCBIfam heavy metal translocating P-type ATPase 363 959 IPR027256 GO:0006812|GO:0016020|GO:0019829
Arst5g01326 979 Gene3D - 418 534 - -
Arst5g01326 979 Pfam haloacid dehalogenase-like hydrolase 640 864 - -
Arst5g01326 979 ProSiteProfiles Heavy-metal-associated domain profile. 198 264 IPR006121 GO:0046872
Arst5g01326 979 ProSitePatterns Heavy-metal-associated domain. 50 79 IPR017969 GO:0046872
Arst5g01326 979 FunFam Copper-transporting ATPase HMA5 43 114 - -
Arst5g01326 979 ProSitePatterns E1-E2 ATPases phosphorylation site. 646 652 IPR018303 -
Arst5g01326 979 Gene3D - 611 907 IPR023214 -
Arst5g01326 979 Gene3D - 40 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01326 Arst-Chr5 14201013 14217087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01326 44 979 Primary Pumps ATPases AT1G63440 72.698 0.0 1422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01326 K17686 - gmx:100817431 1532.31