Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01324 ATGAAGAAGCTATGCACTTCATTGTTGTTGTTGTTTCTGGGTTTGGTTTCCATGGTCGCTCTTGTGGCTTCTGATTCTCTGCCCCCAAATGAAGTTTGGGCGCTTTCTAGCTTCAAAGAAGCCATGTATGATGACCCTTTTCTAGCTCTATCCAATTGGAATACGATAGATTCAGATCCTTGTAACTGGTTTGGTGTCTTATGCACTACTGCTAGAGATCATGTCATCAAACTAAACATTTCAGGATCATCGTTGAAGGGATTTCTTGCACCAGAGTTGGGGCAAATCACCTACTTGCAAGAACTAATTTTGAGCGACAATGAACTCATAGGAATAATACCTAAAGAGTTGAGCATGTTGAAGTCCCTTAAGGTGCTGGACTTGGGAAATAATCAGTTATCCGGACCAATTCCTCCAGAGCTTGGAAATTTAACTGAACTCGTGAACATGAATCTGCAGTCCAATGATCTGACTGGCAGGTTACCTCCGGAGCTTGGGAATTTGAAATACCTTCAAGAACTTCGGCTCGATAGGAATAAGCTCCAAGGGCCTGTTCCTGGTGGTGACAGTTCAAATTTTTCCTCAACTATCAATGGGATGTATGCTACAAATGCAAATTTAACTGGCTTCTGTCGTTGGTCTCAGTTAAAAGTAGCGGACTTTTCGTATAACTATTTAGTTGGCAGCATACCTGATTGCTTGCATTATCTTCCAAGTTTATACTTTCAAGGAAACTGCCTTCAGATTCAGAACAAAGATGCAAAGCAGCGGCCCTCTATTCAATGTGCCGGTGCATCACCTGCAAGAAGCCAGCCATTGGTGAATCCTAATATGTATGTGTCGAAGCATCATGGAGCATCAAAACCTGTTTGGCTTCTGGCTCTAGAAATAATAACGGGAACCATGGTTGGTTCTCTCTTTCTGATTGCCCTTCTCGCTGCCCTTCAGAGGTGGAATAAAAAAGCATCCATCATTATTCCTTGGAAAAAATCTACAAGCCAGAACGACAGCACGACAGTATATATAGACCCCGAGATGTTGAAGGATGTGAGAAGGTATACCAGACAAGAGCTTGAAGTTGCCTGCGAAGACTTTAGCAACATAATCGGGTCATCACCGGACAGTGTGGTCTACAAGGGAACCATGAAAGGTGGACCTGAGATTGCTGTAATCTCCCTCTGCATCAAGGAGGAGCATTGGACAGGATATCTTGAACTCTATTTTCAAAGAGAGGTGGCAGACTTGGCAAGGTTAGATCATGAGAATACAGGAAAACTGCTGGGGTATTGTAGAGAGAGCACTCCATTTACAAGGATGTTAGTTTTTGAATATGCTTCAAATGGGACACTTCATGAGCACCTACATTGCTACGGAGAAAGATGTCAATTCTCCTGGACAAGGCGTATGAAAATCATAATAGGCATTGCGCGTGGGCTCAAGTATCTACATACGGAAATTGAGCCTCCATTCACTATTTCAGAGCTGAATTCTAGTGCTGTATACCTTACAGAAGAATTTTCCCCCAAGTTGGTTGATTTCGAAAGTTGGAAGACAATCCTTGAAAGATCAGAAAAGAATTCTGGTTCTATTGGCAGTCAAGGTGCTATTTGTGTCCTTCCAAATTCCGTGGAGGCTCGCCATCTCGATACAAAAGGAAACATACATGCTTTCGGGGTACTTCTACTGGAGATAATCAGTGGAAGACTTCCATACTGCAAGAACAAGGGGTACTTGGTTGATTGGGCCAAGGACTATCTTGAAATGCCAGAAGTGATGTCATATGTGGTGGATCCGGAATTGAAACATTTCAGATATGATGACCTCAAAGTGATATGTGAAGTAGTGAGCCTCTGTATCAACCCTGATACCACTGCTCGCCCGTCTATGCGAGAATTATGCGTCATGCTTGAGAGCAGAATCGACACGTCAACTAGCGTGGAGCTCAAGTCATCATCATTGGCCTGGGCTGAACTTGCACTCTTATCATAA 1989 0.4319 MKKLCTSLLLLFLGLVSMVALVASDSLPPNEVWALSSFKEAMYDDPFLALSNWNTIDSDPCNWFGVLCTTARDHVIKLNISGSSLKGFLAPELGQITYLQELILSDNELIGIIPKELSMLKSLKVLDLGNNQLSGPIPPELGNLTELVNMNLQSNDLTGRLPPELGNLKYLQELRLDRNKLQGPVPGGDSSNFSSTINGMYATNANLTGFCRWSQLKVADFSYNYLVGSIPDCLHYLPSLYFQGNCLQIQNKDAKQRPSIQCAGASPARSQPLVNPNMYVSKHHGASKPVWLLALEIITGTMVGSLFLIALLAALQRWNKKASIIIPWKKSTSQNDSTTVYIDPEMLKDVRRYTRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARLDHENTGKLLGYCRESTPFTRMLVFEYASNGTLHEHLHCYGERCQFSWTRRMKIIIGIARGLKYLHTEIEPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGSIGSQGAICVLPNSVEARHLDTKGNIHAFGVLLLEIISGRLPYCKNKGYLVDWAKDYLEMPEVMSYVVDPELKHFRYDDLKVICEVVSLCINPDTTARPSMRELCVMLESRIDTSTSVELKSSSLAWAELALLS 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01324 662 SUPERFAMILY L domain-like 28 241 - -
Arst5g01324 662 PANTHER PROTEIN MALE DISCOVERER 2 15 662 - -
Arst5g01324 662 Gene3D Transferase(Phosphotransferase) domain 1 445 653 - -
Arst5g01324 662 Pfam Protein tyrosine and serine/threonine kinase 367 634 IPR001245 GO:0004672|GO:0006468
Arst5g01324 662 ProSiteProfiles Protein kinase domain profile. 363 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g01324 662 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Arst5g01324 662 Gene3D Ribonuclease Inhibitor 142 261 IPR032675 -
Arst5g01324 662 Gene3D Ribonuclease Inhibitor 30 141 IPR032675 -
Arst5g01324 662 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 29 191 - -
Arst5g01324 662 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Arst5g01324 662 SUPERFAMILY Protein kinase-like (PK-like) 339 637 IPR011009 -
Arst5g01324 662 FunFam Inactive receptor-like serine/threonine-protein kinase 337 444 - -
Arst5g01324 662 Gene3D Phosphorylase Kinase; domain 1 336 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01324 Arst-Chr5 14191848 14196251 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01324 37 641 Receptor kinase-like Gene Family AT5G45780 29.887 2.38e-56 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Arst5g01324 PK_Tyr_Ser-Thr 5.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01324 - - ahf:112749652 1271.14