Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01323 ATGAAGAAGCTATGCACTTCATTGTTGTTGTTGTTTCTGGGTTTGGTTTCCATGGTCGCTCTTGTGGCTTCTGATTCTCTGCCCCCAAATGAAGTTTGGGCGCTTTCTAGCTTCAAAGAAGCCATGTATGATGACCCTTTTCTAGCTCTATCCAATTGGAATACGATAGATTCAGATCCTTGTAACTGGTTTGGTGTCTTATGCACTACTGCTAGAGATCATGTCATCAAACTAAACATTTCAGGATCATCGTTGAAGGGATTTCTTGCACCAGAGTTGGGGCAAATCACCTACTTGCAAGAACTAATTTTGAGCGACAATGAACTCATAGGAATAATACCTAAAGAGTTGAGCATGTTGAAGTCCCTTAAGGTGCTGGACTTGGGAAATAATCAGTTATCCGGACCAATTCCTCCAGAGCTTGGAAATTTAACTGAACTCGTGAACATGAATCTGCAGTCCAATGATCTGACTGGCAGGTTACCTCCGGAGCTTGGGAATTTGAAATACCTTCAAGAACTTCGGCTCGATAGGAATAAGCTCCAAGGGCCTGTTCCTGGTGGTGACAGTTCAAATTTTTCCTCAACTATCAATGGGATTTCCCATAATTTCTTCAGGTATGCTACAAATGCAAATTTAACTGGCTTCTGTCGTTGGTCTCAGTTAAAAGTAGCGGACTTTTCGTATAACTATTTAGTTGGCAGCATACCTGATTGCTTGCATTATCTTCCAAGTTTATACTTTCAAGGAAACTGCCTTCAGATTCAGAACAAAGATGCAAAGCAGCGGCCCTCTATTCAATGTGCCGGTGCATCACCTGCAAGAAGCCAGCCATTGGTGAATCCTAATATGTATGTGTCGAAGCATCATGGAGCATCAAAACCTGTTTGGCTTCTGGCTCTAGAAATAATAACGGGAACCATGGTTGGTTCTCTCTTTCTGATTGCCCTTCTCGCTGCCCTTCAGAGGTGGAATAAAAAAGCATCCATCATTATTCCTTGGAAAAAATCTACAAGCCAGAACGACAGCACGACAGTATATATAGACCCCGAGATGTTGAAGGATGTGAGAAGGTATACCAGACAAGAGCTTGAAGTTGCCTGCGAAGACTTTAGCAACATAATCGGGTCATCACCGGACAGTGTGGTCTACAAGGGAACCATGAAAGGTGGACCTGAGATTGCTGTAATCTCCCTCTGCATCAAGGAGGAGCATTGGACAGGATATCTTGAACTCTATTTTCAAAGAGAGGTGGCAGACTTGGCAAGGTTAGATCATGAGAATACAGGAAAACTGCTGGGGTATTGTAGAGAGAGCACTCCATTTACAAGGATGTTAGTTTTTGAATATGCTTCAAATGGGACACTTCATGAGCACCTACATTGCTACGGAGAAAGATGTCAATTCTCCTGGACAAGGCGTATGAAAATCATAATAGGCATTGCGCGTGGGCTCAAGTATCTACATACGGAAATTGAGCCTCCATTCACTATTTCAGAGCTGAATTCTAGTGCTGTATACCTTACAGAAGAATTTTCCCCCAAGTTGGTTGATTTCGAAAGTTGGAAGACAATCCTTGAAAGATCAGAAAAGAATTCTGGTTCTATTGGCAGTCAAGGTGCTATTTGTGTCCTTCCAAATTCCGTGGAGGCTCGCCATCTCGATACAAAAGGAAACATACATGCTTTCGGGGTACTTCTACTGGAGATAATCAGTGGAAGACTTCCATACTGCAAGAACAAGGGGTACTTGGTTGATTGGGCCAAGGACTATCTTGAAATGCCAGAAGTGATGTCATATGTGGTGGATCCGGAATTGAAACATTTCAGATATGATGACCTCAAAGTGATATGTGAAGTAGTGAGCCTCTGTATCAACCCTGATACCACTGCTCGCCCGTCTATGCGAGAATTATGCGTCATGCTTGAGAGCAGAATCGACACGTCAACTAGCGTGGAGCTCAAGTCATCATCATTGGCCTGGGCTGAACTTGCACTCTTATCATAA 2007 0.431 MKKLCTSLLLLFLGLVSMVALVASDSLPPNEVWALSSFKEAMYDDPFLALSNWNTIDSDPCNWFGVLCTTARDHVIKLNISGSSLKGFLAPELGQITYLQELILSDNELIGIIPKELSMLKSLKVLDLGNNQLSGPIPPELGNLTELVNMNLQSNDLTGRLPPELGNLKYLQELRLDRNKLQGPVPGGDSSNFSSTINGISHNFFRYATNANLTGFCRWSQLKVADFSYNYLVGSIPDCLHYLPSLYFQGNCLQIQNKDAKQRPSIQCAGASPARSQPLVNPNMYVSKHHGASKPVWLLALEIITGTMVGSLFLIALLAALQRWNKKASIIIPWKKSTSQNDSTTVYIDPEMLKDVRRYTRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARLDHENTGKLLGYCRESTPFTRMLVFEYASNGTLHEHLHCYGERCQFSWTRRMKIIIGIARGLKYLHTEIEPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGSIGSQGAICVLPNSVEARHLDTKGNIHAFGVLLLEIISGRLPYCKNKGYLVDWAKDYLEMPEVMSYVVDPELKHFRYDDLKVICEVVSLCINPDTTARPSMRELCVMLESRIDTSTSVELKSSSLAWAELALLS 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01323 668 FunFam Inactive receptor-like serine/threonine-protein kinase 343 450 - -
Arst5g01323 668 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Arst5g01323 668 Gene3D Phosphorylase Kinase; domain 1 342 450 - -
Arst5g01323 668 SUPERFAMILY Protein kinase-like (PK-like) 345 643 IPR011009 -
Arst5g01323 668 Gene3D Ribonuclease Inhibitor 28 269 IPR032675 -
Arst5g01323 668 Pfam Protein tyrosine and serine/threonine kinase 373 640 IPR001245 GO:0004672|GO:0006468
Arst5g01323 668 ProSiteProfiles Protein kinase domain profile. 369 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g01323 668 PANTHER PROTEIN MALE DISCOVERER 2 15 668 - -
Arst5g01323 668 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Arst5g01323 668 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 29 191 - -
Arst5g01323 668 SUPERFAMILY L domain-like 28 247 - -
Arst5g01323 668 Gene3D Transferase(Phosphotransferase) domain 1 451 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01323 Arst-Chr5 14191846 14196251 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01323 37 647 Receptor kinase-like Gene Family AT5G45780 29.600 1.69e-55 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Arst5g01323 PK_Tyr_Ser-Thr 5.7e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01323 - - ahf:112749652 1292.33