Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01322 ATGAAGAAGCTATGCACTTCATTGTTGTTGTTGTTTCTGGGTTTGGTTTCCATGGTCGCTCTTGTGGCTTCTGATTCTCTGCCCCCAAATGAAGTTTGGGCGCTTTCTAGCTTCAAAGAAGCCATGTATGATGACCCTTTTCTAGCTCTATCCAATTGGAATACGATAGATTCAGATCCTTGTAACTGGTTTGGTGTCTTATGCACTACTGCTAGAGATCATGTCATCAAACTAAACATTTCAGGATCATCGTTGAAGGGATTTCTTGCACCAGAGTTGGGGCAAATCACCTACTTGCAAGAACTAATTTTGAGCGACAATGAACTCATAGGAATAATACCTAAAGAGTTGAGCATGTTGAAGTCCCTTAAGGTGCTGGACTTGGGAAATAATCAGTTATCCGGACCAATTCCTCCAGAGCTTGGAAATTTAACTGAACTCGTGAACATGAATCTGCAGTCCAATGATCTGACTGGCAGGTTACCTCCGGAGCTTGGGAATTTGAAATACCTTCAAGAACTTCGGCTCGATAGGAATAAGCTCCAAGGGCCTGTTCCTGGTGGTGACAGTTCAAATTTTTCCTCAACTATCAATGGGATGTATGCTACAAATGCAAATTTAACTGGCTTCTGTCGTTGGTCTCAGTTAAAAGTAGCGGACTTTTCGTATAACTATTTAGTTGGCAGCATACCTGATTGCTTGCATTATCTTCCAAGTTTATACTTTCAAGGAAACTGCCTTCAGATTCAGAACAAAGATGCAAAGCAGCGGCCCTCTATTCAATGTGCCGGTGCATCACCTGCAAGAAGCCAGCCATTGGTGAATCCTAATATGTATGTGTCGAAGCATCATGGAGCATCAAAACCTGTTTGGCTTCTGGCTCTAGAAATAATAACGGGAACCATGGTTGGTTCTCTCTTTCTGATTGCCCTTCTCGCTGCCCTTCAGAGGTGGAATAAAAAAGCATCCATCATTATTCCTTGGAAAAAATCTACAAGCCAGAACGACAGCACGACAGTATATATAGACCCCGAGATGTTGAAGGATGTGAGAAGGTATACCAGACAAGAGCTTGAAGTTGCCTGCGAAGACTTTAGCAACATAATCGGGTCATCACCGGACAGTGTGGTCTACAAGGGAACCATGAAAGGTGGACCTGAGATTGCTGTAATCTCCCTCTGCATCAAGGAGGAGCATTGGACAGGATATCTTGAACTCTATTTTCAAAGAGAGGTGGCAGACTTGGCAAGGTTAGATCATGAGAATACAGGAAAACTGCTGGGGTATTGTAGAGAGAGCACTCCATTTACAAGGATGTTAGTTTTTGAATATGCTTCAAATGGGACACTTCATGAGCACCTACATTGCTACGGAGAAAGATGTCAATTCTCCTGGACAAGGCGTATGAAAATCATAATAGGCATTGCGCGTGGGCTCAAGTATCTACATACGGAAATTGAGCCTCCATTCACTATTTCAGAGCTGAATTCTAGTGCTGTATACCTTACAGAAGAATTTTCCCCCAAGTTGGTTGATTTCGAAAGTTGGAAGACAATCCTTGAAAGATCAGAAAAGAATTCTGGTTCTATTGGCAGTCAAGGTGCTATTTGTGTCCTTCCAAATTCCGTGGAGGCTCGCCATCTCGATACAAAAGGAAACATACATGCTTTCGGGGTACTTCTACTGGAGATAATCAGTGGAAGACTTCCATACTGCAAGAACAAGGGGTACTTGGTTGATTGGGTAATGAAAAACTTGACAAAATGTTATGTTAAAAAACGTTTGGTTTGGCTAAGTGGTTATGCTAAACGTGTATATGTGATGCCTCTGCAGGCCAAGGACTATCTTGAAATGCCAGAAGTGATGTCATATGTGGTGGATCCGGAATTGAAACATTTCAGATATGATGACCTCAAAGTGATATGTGAAGTAGTGAGCCTCTGTATCAACCCTGATACCACTGCTCGCCCGTCTATGCGAGAATTATGCGTCATGCTTGAGAGCAGAATCGACACGTCAACTAGCGTGGAGCTCAAGTCATCATCATTGGCCTGGGCTGAACTTGCACTCTTATCATAA 2079 0.4281 MKKLCTSLLLLFLGLVSMVALVASDSLPPNEVWALSSFKEAMYDDPFLALSNWNTIDSDPCNWFGVLCTTARDHVIKLNISGSSLKGFLAPELGQITYLQELILSDNELIGIIPKELSMLKSLKVLDLGNNQLSGPIPPELGNLTELVNMNLQSNDLTGRLPPELGNLKYLQELRLDRNKLQGPVPGGDSSNFSSTINGMYATNANLTGFCRWSQLKVADFSYNYLVGSIPDCLHYLPSLYFQGNCLQIQNKDAKQRPSIQCAGASPARSQPLVNPNMYVSKHHGASKPVWLLALEIITGTMVGSLFLIALLAALQRWNKKASIIIPWKKSTSQNDSTTVYIDPEMLKDVRRYTRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARLDHENTGKLLGYCRESTPFTRMLVFEYASNGTLHEHLHCYGERCQFSWTRRMKIIIGIARGLKYLHTEIEPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGSIGSQGAICVLPNSVEARHLDTKGNIHAFGVLLLEIISGRLPYCKNKGYLVDWVMKNLTKCYVKKRLVWLSGYAKRVYVMPLQAKDYLEMPEVMSYVVDPELKHFRYDDLKVICEVVSLCINPDTTARPSMRELCVMLESRIDTSTSVELKSSSLAWAELALLS 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01322 692 Gene3D Phosphorylase Kinase; domain 1 336 444 - -
Arst5g01322 692 Gene3D Ribonuclease Inhibitor 30 141 IPR032675 -
Arst5g01322 692 FunFam Inactive receptor-like serine/threonine-protein kinase 337 444 - -
Arst5g01322 692 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Arst5g01322 692 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Arst5g01322 692 SUPERFAMILY Protein kinase-like (PK-like) 339 667 IPR011009 -
Arst5g01322 692 PANTHER PROTEIN MALE DISCOVERER 2 611 692 - -
Arst5g01322 692 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 29 191 - -
Arst5g01322 692 Pfam Protein tyrosine and serine/threonine kinase 367 577 IPR001245 GO:0004672|GO:0006468
Arst5g01322 692 Gene3D Transferase(Phosphotransferase) domain 1 445 683 - -
Arst5g01322 692 Gene3D Ribonuclease Inhibitor 142 261 IPR032675 -
Arst5g01322 692 SUPERFAMILY L domain-like 28 241 - -
Arst5g01322 692 ProSiteProfiles Protein kinase domain profile. 363 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01322 Arst-Chr5 14191841 14196251 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01322 37 671 Receptor kinase-like Gene Family AT5G45780 29.457 7.33e-53 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Arst5g01322 PK_Tyr_Ser-Thr 3.7e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01322 - - ahf:112749652 1346.64