Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01307 ATGGTTGGACAGGGTCTAATTGGATGTGATTTACCAAAAAAGTGTGATATGATGTTGGAGGTTGAGACGGAGCTCGAGGAGTTGAGTTTTGAATTTGATTCATCTGAAGGAGATGGAGTCCATTTATGCCTTTCTTCTTCAAATTGCAACTGTGATGCCACTCTTCTGAAATCCACCCCTGCTGAAGCTAGACGCTGGTCGGAGGAAGAGGACAACCTTTTGATTCAGATAGTCAAGAAGCATGAAGCTAGGAATTGGAAGAAAATAGCTGCGTATCTTTCAGGGCGAACTGAAGCCCAATGCTTACATCGCTGGCAGAAAGTTTTGGATCCTGATCTTGTGAAGGGTTATTGGACAAAGGAGGAGGATGATCGCCTCACTGAGCTAGTAAGAAAGTATGGTTTGAAGAGATGGGCCGAAATTGCAAAATTCTTACCGGGTCGAATTGGGAAGCAATGCCGAGAGAGGTGGCACAATAATCTTGATCCAGCTATAAAGAAAGATGCATGGACGGAGGAAGAGGAATTGGCACTTGCTCACTATCACCAAATATATGGTAGTAAGTGGGCAGTGATTGCAAGGTATCTTCCTGGAAGGTCTGACAACGCCATTAAAAATCATTGGAACCGCTCAATGAAAAAGAAAGGGGATGCATCTTCACATCTTGGGTTTGACCTAAATGTTGCTACTTCCGGTTTTCGCACATCTCCAATAGTTCCAGCTCATGTTTCAGTTAAAGTAGATAGCCATAGTTTCAATGAAATGGATTCGAAGCACAGGGTTGACAACTTCCCAACACACTTGGTTCTTCAAAAGCCCAGTAAATCTCCCAAACGACAGAAAGTTTCTTCCTCAGATGCCAAGAGAGACCAAGTTGGAAATGGAAGCAACAACAAAATCAACAGTACGTGCCATAATGCAGATGACATGAGTAACGACATAGGATGTGGGGACAATAATGACAGCAGAGATACTCGCACAATGTTTGAACAAAGTCCAGAACGTGTACTAAGAAGCTTAGCCATGACCTATGAGAATATTCCTTCTATTATTAGGAAACGAACTCCCACCAAGGCTGAGTGTGCCCAAACTCCTGAAGACGAACGTGTTATTAGTTTACGAAATTTAAAATTGAGCCGGGAGTTTATTCCATCCATTATTACTACACCAAACACTAAAGCCATAGCTAAATCTCTAGAAGGATACATGGAATGA 1215 0.4247 MVGQGLIGCDLPKKCDMMLEVETELEELSFEFDSSEGDGVHLCLSSSNCNCDATLLKSTPAEARRWSEEEDNLLIQIVKKHEARNWKKIAAYLSGRTEAQCLHRWQKVLDPDLVKGYWTKEEDDRLTELVRKYGLKRWAEIAKFLPGRIGKQCRERWHNNLDPAIKKDAWTEEEELALAHYHQIYGSKWAVIARYLPGRSDNAIKNHWNRSMKKKGDASSHLGFDLNVATSGFRTSPIVPAHVSVKVDSHSFNEMDSKHRVDNFPTHLVLQKPSKSPKRQKVSSSDAKRDQVGNGSNNKINSTCHNADDMSNDIGCGDNNDSRDTRTMFEQSPERVLRSLAMTYENIPSIIRKRTPTKAECAQTPEDERVISLRNLKLSREFIPSIITTPNTKAIAKSLEGYME 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01307 404 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 166 216 IPR017930 -
Arst5g01307 404 SUPERFAMILY Homeodomain-like 112 208 IPR009057 -
Arst5g01307 404 CDD SANT 118 161 IPR001005 -
Arst5g01307 404 ProSiteProfiles Myb-like domain profile. 58 109 IPR001005 -
Arst5g01307 404 Gene3D - 64 114 - -
Arst5g01307 404 Gene3D - 168 223 - -
Arst5g01307 404 CDD SANT 65 109 IPR001005 -
Arst5g01307 404 Gene3D - 115 166 - -
Arst5g01307 404 SMART sant 166 214 IPR001005 -
Arst5g01307 404 SMART sant 62 111 IPR001005 -
Arst5g01307 404 SMART sant 114 163 IPR001005 -
Arst5g01307 404 Pfam Myb-like DNA-binding domain 115 161 IPR001005 -
Arst5g01307 404 Pfam Myb-like DNA-binding domain 65 109 IPR001005 -
Arst5g01307 404 Pfam Myb-like DNA-binding domain 167 209 IPR001005 -
Arst5g01307 404 ProSiteProfiles Myb-like domain profile. 162 212 IPR001005 -
Arst5g01307 404 FunFam Transcriptional activator Myb isoform A 115 167 - -
Arst5g01307 404 CDD SANT 169 210 IPR001005 -
Arst5g01307 404 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 110 165 IPR017930 -
Arst5g01307 404 FunFam Transcriptional activator Myb isoform A 63 114 - -
Arst5g01307 404 SUPERFAMILY Homeodomain-like 64 119 IPR009057 -
Arst5g01307 404 ProSiteProfiles Myb-like domain profile. 110 161 IPR001005 -
Arst5g01307 404 MobiDBLite consensus disorder prediction 267 330 - -
Arst5g01307 404 MobiDBLite consensus disorder prediction 287 318 - -
Arst5g01307 404 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 109 IPR017930 -
Arst5g01307 404 PANTHER MYB PROTEIN-RELATED 65 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01307 Arst-Chr5 14092139 14096260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01307 66 215 MYB Transcription Factor Family AT5G02320 66.000 2.63e-69 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst5g01307 Myb_DNA-binding 1.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01307 - K09420 adu:107488127 812.372