Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01305 ATGACGCCATTGCCGGTGGAGCAGACGGGCGAATCAGGGGCGACGGAGTCACAGAGATCCATTCCGACGCCGTTTCTGACGAAGACGTACCAGCTGGTGGACGATCCCTCTGCTGATGACCTAATTTCATGGAACGAAGATGGCACCACCTTTATTGTTTGGCGACCAGCTGAATTCGCTCGAGATTTGCTTCCCAAGTATTTCAAGCACAACAACTTCTCCAGCTTCGTTCGCCAGCTCAACACCTACGGATTTCGCAAGGTCGTACCTGACCGCTGGGAATTCGCTAATGAATGTTTCCGGCGAGGGGAGAAAGGTTTGCTTCGCGACATACAGAGGCGTAAAATATCGCCGGCAGCTGGTGACAATAACGTGGTGACGGTTGCCATGGCAGCACCGGGGAGAGTGGTGTCGCCTACGCCGACGAATTCCGGCGACGAACAGGTACTATCCTCCAACTCATCTCCGATTGCTCCTCCTGCTGCTGCGCAACACAACAATAATAGTAAAAATACAGTGCACCGCACTACCAGTTGCACCAGTGGACCCGAGCTATTAGAAGAGAACGAGAGGCTTAGGAAAGAGAATGGTCAAATGAAAAACGAGTTGAGTCAATTGAGAGGTTTGTGTAATAAAATACTGGCGCTGATGTCAAACTATGCTTCTCGTTCTTCAGCGCAATTACTAGACTCCTCTGCAAGTGGCGTCGCCGCCGCGGTAGTTGAAGGGAAAGTGGCGTTGGAGCTTTTGCCTGAGAAGGGCGTTCCATGTGCTGTTGACACCGCCGAAGCGGAGGTTCCGAAGTTGTTTGGGGTTTCCATTGGGATGAAACGTTCTAGAACCGAAAGCGAGGCTGAAATTGAAAGAGAAGATCACAATCAAACGCAAACACAAAGGAAAACACAGTCATCACAGGAACCTGAACGCGGGTCAGATGTGAAATCTGAGCCGTTGGATGGGGACGGATCGGATGATCAGGACCCTCGATGGGTCGAGCTTGGGTAA 1005 0.5144 MTPLPVEQTGESGATESQRSIPTPFLTKTYQLVDDPSADDLISWNEDGTTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANECFRRGEKGLLRDIQRRKISPAAGDNNVVTVAMAAPGRVVSPTPTNSGDEQVLSSNSSPIAPPAAAQHNNNSKNTVHRTTSCTSGPELLEENERLRKENGQMKNELSQLRGLCNKILALMSNYASRSSAQLLDSSASGVAAAVVEGKVALELLPEKGVPCAVDTAEAEVPKLFGVSIGMKRSRTESEAEIEREDHNQTQTQRKTQSSQEPERGSDVKSEPLDGDGSDDQDPRWVELG 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01305 334 MobiDBLite consensus disorder prediction 1 20 - -
Arst5g01305 334 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst5g01305 334 MobiDBLite consensus disorder prediction 279 296 - -
Arst5g01305 334 Coils Coil 182 209 - -
Arst5g01305 334 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Arst5g01305 334 Gene3D - 17 115 IPR036388 -
Arst5g01305 334 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 16 306 IPR027725 -
Arst5g01305 334 MobiDBLite consensus disorder prediction 305 334 - -
Arst5g01305 334 MobiDBLite consensus disorder prediction 135 185 - -
Arst5g01305 334 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst5g01305 334 FunFam Heat stress transcription factor B-4 17 115 - -
Arst5g01305 334 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst5g01305 334 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst5g01305 334 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst5g01305 334 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst5g01305 334 MobiDBLite consensus disorder prediction 137 184 - -
Arst5g01305 334 MobiDBLite consensus disorder prediction 277 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01305 Arst-Chr5 14078307 14080249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01305 16 334 HSF AT4G11660 52.770 2.32e-98 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Arst5g01305 HSF_DNA-bind 1.5e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01305 K09419 - gmx:100791020 448.358