Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01302 ATGGCTGTGAGGAAGGATTTCGTGAGGGATATCAATCCAACCAAGCTTGCCTGGTCCTTGGGTGATAGAATTCATGCAATCGTTTGCAAGCCTGGGTTGGAGTTGTTTAAAAATAGGATAAAAGAGCATTGTGTTTATAGTATGCAAAATTTTATTGTCAAGCTTAACAATGGAAAGGTTAGGACAACTCCTCACAAGTACAAGCTTAACTTTTATACAAAGACTATGGTGGCAGTCCTACCTATTGAGACTTTTGCTTTTAACCCATTCAAGTTCCGTCCGTTTCATGAACTTGATGAAAATGGTTCAACCGACAGAAATCTATTATTTGGAGAGGTTGTTGGAAAGGAAGAAGTCAGGGAGATGATTACACACACTGGTGATGAAACGAAGCTTATTACACTTCAGTTGGAAGATCTAGAAAAGTACAAAATTAAATGTACATTGCTTGGGGAATTGGTCGATGAAGTTCTTTCACATCTCGAGCAAGATGATGGGGAGCCTTTCCTAATAGTGGTTCAGCTCTTTAAGTCCAACATGTACTTGAATTCTGTCAATATTCAAAGCAGCTACTATGTGTCCACATGTTACTTCAATCCAAACCTTCCTGAGGTTATTGACTTCAAGAAAAGATTGGCAACTGATTTTATTTCATGTTCACAACGAATTAGTCAGTTGAAAACTCAACCTCAATACTTAGTCACAGATGAGATCAATGCCAGCATTGTACCAGTGCGCACTATAGAAGAGGTTCTTAATATGACTGAGGTTGGTAAAGATGATTGGTCCTATATGTCATGTAAGACATGTCCTAAGAAGGTTGTGCAGAGCAAAGATAAGTATTGGTGTGATAATTGTAGGCGTGTAGGCTTCAAGGTTATGCTAAGGTATAGGCTCCAAGTAATTGTGACTGATGGAAGTGGTTGTCTGAAGCTCCTTATGTGGAACAAAGAAGCATAG 960 0.3896 MAVRKDFVRDINPTKLAWSLGDRIHAIVCKPGLELFKNRIKEHCVYSMQNFIVKLNNGKVRTTPHKYKLNFYTKTMVAVLPIETFAFNPFKFRPFHELDENGSTDRNLLFGEVVGKEEVREMITHTGDETKLITLQLEDLEKYKIKCTLLGELVDEVLSHLEQDDGEPFLIVVQLFKSNMYLNSVNIQSSYYVSTCYFNPNLPEVIDFKKRLATDFISCSQRISQLKTQPQYLVTDEINASIVPVRTIEEVLNMTEVGKDDWSYMSCKTCPKKVVQSKDKYWCDNCRRVGFKVMLRYRLQVIVTDGSGCLKLLMWNKEA 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01302 319 Gene3D - 10 78 IPR012340 -
Arst5g01302 319 SUPERFAMILY Nucleic acid-binding proteins 245 319 IPR012340 -
Arst5g01302 319 Gene3D - 220 319 IPR012340 -
Arst5g01302 319 Gene3D - 85 218 IPR012340 -
Arst5g01302 319 CDD RPA1_DBD_A_like 21 77 - -
Arst5g01302 319 CDD RPA1_DBD_B_like 121 212 - -
Arst5g01302 319 Pfam Domain of unknown function DUF223 19 78 IPR003871 -
Arst5g01302 319 Pfam Replication factor-A C terminal domain 256 318 IPR013955 -
Arst5g01302 319 SUPERFAMILY Nucleic acid-binding proteins 21 81 IPR012340 -
Arst5g01302 319 SUPERFAMILY Nucleic acid-binding proteins 90 218 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01302 Arst-Chr5 13972957 13974883 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01302 21 319 Core DNA Replication Machinery Family AT5G08020 23.547 7.95e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01302 - - adu:107463979 563.533