Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01269 ATGGCTTGTCTCTCGCTGCAACTGCTGCTTTTGTGTTTCACCACTCTCACAATTCATGCGACAAAGGTGACATGTGCAGAACCCTACCATCACCGTAGCACCCTTAGAACATTGTCTTCTTCTTCTTCTACCAAATCCTCCTCCAATCATCGTCGGAACCACACTTGGGTGGGACCAATAGGTCAGCGCGTAATCACCGTTGACGTCAACGGCGGTGGACAGTTCCGGTCGGTGCAAGCTGCGGTGAATGCCGTCCCAGACAACAATAGAATGAACATACTGATCCAAATCAGCCCGGGATACTACATAGAGAAGGTTGTTGTGCCCGTGACGAAGCCGTACATAACGTTTGAGGGAGCGGGAAAAGAAGTGACGGTGATCGAATGGCATGATAGGGCCAGCGACCCTGGTCCCAACGGACAGCAACTGCGTACTTACAGAACTGCTTCTGTCACTGTTTTCGCCAACTATTTCTCTGCTCGCAATATCAGCTTCAAGAACACAGCGCCAGCACCAATGCCGGGGATGCATGGCTGGCAAGCGGCGGCGTTTCGAATATCCGGTGACAAAGCATACTTCTCAGGCTGTGGATTCTACGGAGCACAAGACACTCTTTGCGACGACGCTGGCAGGCATTACTTCAAGGACTGCTATATCGAGGGTTCAATTGATTTCATATTTGGGAATGGCAGATCCATGTACAAGGATTGCCAGCTACACTCAATAGCAACGAGATTTGGCTCCATAGCAGCCCATGATAGGAAACAGGCAGAGGAGAAGACGGGCTTTGCATTCGTGAGATGCAGGGTGACGGGCACAGGCCCGCTCTATGTGGGCAGAGCCATGGGCCAGTACTCCAGAATTGTCTACTCTTACACTTACTTCGATGACATTGTTGCTCATGGCGGCTGGGATGATTGGGACCATGCCAACAATAAGAACAAGACTGTGTTCTTTGGAGTGTACAAGTGTTGGGGGCCAGGAGCAGAGGCAGTACGTGGGGTATCATGGGCCAAAGAGTTAGATTTCGAATCTGCCCACCCATTTCTCGTCAAGAGCTTTGTCAATGGCAGACACTGGATTGCGCCTTCTGATGCCTAG 1101 0.5104 MACLSLQLLLLCFTTLTIHATKVTCAEPYHHRSTLRTLSSSSSTKSSSNHRRNHTWVGPIGQRVITVDVNGGGQFRSVQAAVNAVPDNNRMNILIQISPGYYIEKVVVPVTKPYITFEGAGKEVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMHGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKDCYIEGSIDFIFGNGRSMYKDCQLHSIATRFGSIAAHDRKQAEEKTGFAFVRCRVTGTGPLYVGRAMGQYSRIVYSYTYFDDIVAHGGWDDWDHANNKNKTVFFGVYKCWGPGAEAVRGVSWAKELDFESAHPFLVKSFVNGRHWIAPSDA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01269 366 ProSitePatterns Pectinesterase signature 2. 219 228 IPR033131 -
Arst5g01269 366 Gene3D - 61 365 IPR012334 -
Arst5g01269 366 SUPERFAMILY Pectin lyase-like 62 363 IPR011050 -
Arst5g01269 366 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 60 362 - -
Arst5g01269 366 FunFam Pectinesterase 61 363 - -
Arst5g01269 366 Pfam Pectinesterase 65 357 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01269 Arst-Chr5 13605024 13608955 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01269 32 366 Carbohydrate Esterase AT5G47500 76.418 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01269 - - cam:101501763 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01269 5 13605024 13608955 Arst5g01269 5 13605024 13608955 ECH