Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01267 ATGGATGAACCAAATGAAGCACCAGAAAACCGAGAACTCTACGCACTTCTCAACTTGTCTCCAGAAGCTTCCGATGAAGAAATCCGCAGAGCTTATCGCCAATGGGCGCAAGCATATCACCCTGATAAATACCAATCCCCTCACATGAAAGATATTGCTACGGAGAATTTTCAACGCATATGTGAGGCCTACGAGATACTGTCAGATTCAAATAAGAGGCAAATATATGATATATATGGCATGGAAGGTGTGAATTCTGGTTTGGAGCTGGGTGCGACTTTGAATAGAGCTGAGGAGATAAAGGCGGAGCTGGAGAGGCTCAAGAGGATGAAGGAACGGGAGAAGATGGCCGCGCATTTTCGATCTTCGGGTACAATTCTCGCCAATATGTCTTTGCCACACTGTCTAAATGGTGATGGCCTCTTCAGAGGAATGGCCATGACAAGCGAAATTCAGTCTGACTTATCGAAGCGTGATGCTATTACAATTGGTGGCAATTTAGCAGTAGATGGAAATGAAGGTGGTGGAGCTGCCACTGCAGTATTCAGGCATCAAATTTCTGAAGCTTCCTCAGTAGAATTAGTGGCTTCAGCTGGTTTACGTGCACTAGTTGGAGTGCAAGCATCTCGTACTTTATCATCACACTCAGCTGCAACAATGGGCCTTGCGCTGTCTTTGCAAGATGGTTCGTTGAATCTTTCAAATTTATGGACCCGCCAATTGTCAGAAACTGCAAGTGGACATATACAGCTTGCTTTGGGAACACAGTCGTCTATAGCTGTCGGCTGGCAAAAGAAAGACGAGAGGAGGTCTGCTTCTGGGGAAGTAAAGTTTGGCACAGGTTCCTTTGATACATCAGTTCATTATACTCATCGCTTTTCTCCTAAATCACTTGGCTGCATTGGAGGAAGAGTAGGAAGTTCTTCCCTTGAGATTGAAGTTGGTGGTGGGAGGAAGATCTCTAAATTCAGCACCGTGCGCTGGTTGTATACAATAGGAATTCAGGGTATTTTCTGGAAATTTGAACTACATCGTGGGGGCCAAAAGTTGATTATTCCTGTAAGGACAAGCAGACACCACTCTGGAGCATTGGTGGTTCCAGCATCTATGTACTTTCTACTGAAGAAATTCATCATTAAACCCTATTACCTTAGAAGGAATAAGCAGAAAGCTCTAGAGAAGGACGAGAAAACATCTTCACAGGTTAAAGAAGCAAGGGCAGCAGCAGAGAAAGCTCAGAAATTACAAGAAAATGTGGCTAACAGGAAAAGAAACAAGCAATTAGAAACAGGTGGACTGGTTATTATGAGAGCACTATATGGAAATGAAAGAGTTTTGTGCAACTTAAATTCGTCAAGTGAGACAAGTCTTGAATCAACTTCAGAAGTCATTGATGTCACCATTCCTCTTAATTTTCTAGTTAATGATTCTGGCCAACTCAAGCTTCATGAAGGTGTAAAAAAATCGGGCATCATGGGGTTTTGTGATCCATGTCCAGGAGAGCCTAAACAGTTGTATATAGAGTATGCTTATGCTGGCAATGAATACAAGGTTTCGGTTGGTGATTATGAAGAATTAATAATACCCCAAGGCGCCCACAGGATATAG 1608 0.4303 MDEPNEAPENRELYALLNLSPEASDEEIRRAYRQWAQAYHPDKYQSPHMKDIATENFQRICEAYEILSDSNKRQIYDIYGMEGVNSGLELGATLNRAEEIKAELERLKRMKEREKMAAHFRSSGTILANMSLPHCLNGDGLFRGMAMTSEIQSDLSKRDAITIGGNLAVDGNEGGGAATAVFRHQISEASSVELVASAGLRALVGVQASRTLSSHSAATMGLALSLQDGSLNLSNLWTRQLSETASGHIQLALGTQSSIAVGWQKKDERRSASGEVKFGTGSFDTSVHYTHRFSPKSLGCIGGRVGSSSLEIEVGGGRKISKFSTVRWLYTIGIQGIFWKFELHRGGQKLIIPVRTSRHHSGALVVPASMYFLLKKFIIKPYYLRRNKQKALEKDEKTSSQVKEARAAAEKAQKLQENVANRKRNKQLETGGLVIMRALYGNERVLCNLNSSSETSLESTSEVIDVTIPLNFLVNDSGQLKLHEGVKKSGIMGFCDPCPGEPKQLYIEYAYAGNEYKVSVGDYEELIIPQGAHRI 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01267 535 ProSiteProfiles dnaJ domain profile. 12 80 IPR001623 -
Arst5g01267 535 Pfam DnaJ domain 13 77 IPR001623 -
Arst5g01267 535 SMART dnaj_3 11 72 IPR001623 -
Arst5g01267 535 Gene3D DnaJ domain 4 107 IPR036869 -
Arst5g01267 535 Coils Coil 90 117 - -
Arst5g01267 535 PANTHER CHAPERONE PROTEIN DNAJ 13 1 535 IPR042162 -
Arst5g01267 535 Coils Coil 402 425 - -
Arst5g01267 535 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
Arst5g01267 535 PRINTS DnaJ domain signature 52 72 IPR001623 -
Arst5g01267 535 PRINTS DnaJ domain signature 14 32 IPR001623 -
Arst5g01267 535 PRINTS DnaJ domain signature 72 91 IPR001623 -
Arst5g01267 535 PRINTS DnaJ domain signature 32 47 IPR001623 -
Arst5g01267 535 CDD DnaJ 12 69 IPR001623 -
Arst5g01267 535 Pfam DnaJ-like protein C11, C-terminal 381 529 IPR024586 -
Arst5g01267 535 SUPERFAMILY Chaperone J-domain 9 88 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01267 Arst-Chr5 13498958 13505883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01267 9 79 C2H2 Transcription Factor Family AT1G74250 41.096 7.17e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01267 K09531 - gmx:100817782 889.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01267 5 13498958 13505883 Arst5g01267 5 13498958 13505883 ECH