Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01248 ATGGGGCCAATGGACTTGAATTCGAGCCATGTTTCTCCTGTTCTTACGGATTCTGTACCTGTGAACAAATCAAGACTAGGAATCCATTCTAGTCTGCTAACATACTCCCAGCAAGATTCATCTTCACCGCACTCGGCAGCACCCGCCCCGGCGGGGAAGCTGCCGAGAACGGGTTCAAGAAAGAGTGCTGCTGGGAGCATTGATGATGTTCGGTTCAATGGGTGGTTGGACGCCATGAAGGCATCTTCCCCTCCCAGGAAGAAGCTTCTTAAAGGATCCATGATTAATGCTCTGCTTCCTTCCAATATTGAATATGACAACGAAGACTACCATATATTGACCGTTGATTACCCTTCTGCACTAGAATGTTTTGAGAAAATCGTAGAGCGTGCCAAGAATAACAAGGTTGCAGTGTTTCTAGATTACGATGGCACTCTTTCTCCAATTGTAGATGACCCTGACTGTGCCTTTATGTCCGAACCTATGCGTGAGACTGTGAGGAGCGTGGCAAGGTGTTTCCCCACAGCAATTATCAGTGGAAGAAGTCGTGACCAGGTGTATGATTTGGTTAAACTAACAGAACTGTACTATGCGGGTAGTCATGGAATGGACATAATTGGGCCTTTTCGCCATAATATGTCCAATAAACTTCCAAATTGTGTCAATTCTACTGACCATCAGGGAAATCAGATAACTCTCTTTCAACCTGCTACACAATTCCTCCCTATCATTGACGAGGTTTTTAGAACCCTCGTTGAGATTACTAAAGATATAAGCGGTGCAAAAGTTGAAAACCACAAGTTTTGTGTTTCTGTACATTACCGTAACGTACAAGAGAACAATTGGACAATTATAGGACAACGTGTCCATGATATCTTGAAAAAATTCCCTGGTTTGCGTTCAACTCATGGACGGAAGGTTTTAGAGGTTCGTCCAGTGATTGACTGGAACAAAGGGAAAGCGGTTGAATTTTTAATGGAATCTCTTGATTTAAATGATAATGATGATGTACTTCCTATCTACATTGGAGATGATAAAACCGATGAAGATGCTTTTAAGATTCTGCGTGAAAGCAATCGTGGTTGTGGGATTTTAGTGTCTTCAGTGAAAAAAGAAAGCAATGCCTCATACTCTCTAAGAGACCCCAATGAGGTCATGGAATTTCTTCAACTCCTGGTTAGGTGGAAAGAGAGAGAAGAAACCAACCATTTCAACAAGCAAATTAAAGTCAAAGTATAG 1239 0.4229 MGPMDLNSSHVSPVLTDSVPVNKSRLGIHSSLLTYSQQDSSSPHSAAPAPAGKLPRTGSRKSAAGSIDDVRFNGWLDAMKASSPPRKKLLKGSMINALLPSNIEYDNEDYHILTVDYPSALECFEKIVERAKNNKVAVFLDYDGTLSPIVDDPDCAFMSEPMRETVRSVARCFPTAIISGRSRDQVYDLVKLTELYYAGSHGMDIIGPFRHNMSNKLPNCVNSTDHQGNQITLFQPATQFLPIIDEVFRTLVEITKDISGAKVENHKFCVSVHYRNVQENNWTIIGQRVHDILKKFPGLRSTHGRKVLEVRPVIDWNKGKAVEFLMESLDLNDNDDVLPIYIGDDKTDEDAFKILRESNRGCGILVSSVKKESNASYSLRDPNEVMEFLQLLVRWKEREETNHFNKQIKVKV 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01248 412 NCBIfam HAD-IIB family hydrolase 138 356 IPR006379 -
Arst5g01248 412 MobiDBLite consensus disorder prediction 36 64 - -
Arst5g01248 412 FunFam Trehalose 6-phosphate phosphatase 243 402 - -
Arst5g01248 412 Pfam Trehalose-phosphatase 139 382 IPR003337 GO:0003824|GO:0005992
Arst5g01248 412 NCBIfam trehalose-phosphatase 134 394 IPR003337 GO:0003824|GO:0005992
Arst5g01248 412 CDD HAD_TPP 137 387 - -
Arst5g01248 412 SUPERFAMILY HAD-like 137 395 IPR036412 -
Arst5g01248 412 Gene3D - 246 408 IPR023214 -
Arst5g01248 412 Gene3D - 136 223 IPR023214 -
Arst5g01248 412 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 53 403 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01248 Arst-Chr5 13275239 13278616 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01248 132 392 Trehalose Biosynthesis Gene Families AT1G70290 24.460 4.94e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01248 K01087 - qsa:O6P43_024315 528.094