Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01240 ATGAACGCATTTTCACATGTTCCTCCTGGGTTTCGGTTCCATCCTACGGATGAAGAACTTGTTGATTACTACCTGAGGAAAAAGATAGCTTCGAAAAGGATTGATCTGGATGTGATAAAAGATGTGGATCTCTATAAAATTGAGCCATGGGATCTTCAAGAAATATGCAAAATAGGAAGCGATGATGAAAATGAATGGTACTTCTTTAGCCATAAAGATAAGAAGTACCCAACAGGGACTCGCACCAATAGAGCTACAAAGGCAGGATTCTGGAAAGCCACGGGAAGAGACAAAGCCATATACTCAAGCTCAAGCCATTGCCTCGTTGGTATGAGAAAGACTCTTGTGTTCTACAAAGGACGAGCTCCCAATGGCCTCAAATCAAACTGGATCATGCACGAGTATCGTCTTGACTCCAATCAGGAAGATGGCTGGGTTGTGTGCAGAGTCTTCAAGAAGCGGATGCCCACGCTACGCAACGTGGTAGACTATGATGATCAACTTCCCTTCATGCAAGGATCTCCATCCACTCACTATCCCTGCAAGCACGAGCTTCATCAATTCCAATACAACACCCATGATGCTTTTCTCCAACTTCCACACCTTGAGAGCCCTAATCAAGTTTTGAGTTGCGGCAGCCCCGTTATTGCACCCTATGCCTACGCCGAAAACAACAACAACAATAATGGAACTAGTAGTACTAGTGCTTTGCAGTCCTATTCATCTGAACGCATTCAGCAACAACTTCACTTGCTTTATGGTAGCAATATTGAGCAAGCAGTAGTGATGGACCAAGTCACGGATTGGAGAGTGCTTGACAAATTTGTTGCTTCTCAACTCATGAGTCAAGATCAAGATCAGGCTTCCAAGGAAACCTGCAGCGTGGCTGATGAACAACATGTTGCTACTACTGTGCTTCCAAATGGATCCACGAAGCAGGAAATGGTGCCTCAGGACGACTATGTTTCAACGTCTGCCTCCAGTAACTGCGATATTCACCTGTGGAATTGA 1011 0.4471 MNAFSHVPPGFRFHPTDEELVDYYLRKKIASKRIDLDVIKDVDLYKIEPWDLQEICKIGSDDENEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSSSSHCLVGMRKTLVFYKGRAPNGLKSNWIMHEYRLDSNQEDGWVVCRVFKKRMPTLRNVVDYDDQLPFMQGSPSTHYPCKHELHQFQYNTHDAFLQLPHLESPNQVLSCGSPVIAPYAYAENNNNNNGTSSTSALQSYSSERIQQQLHLLYGSNIEQAVVMDQVTDWRVLDKFVASQLMSQDQDQASKETCSVADEQHVATTVLPNGSTKQEMVPQDDYVSTSASSNCDIHLWN 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01240 336 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 278 - -
Arst5g01240 336 Gene3D NAC domain 16 156 IPR036093 GO:0003677|GO:0006355
Arst5g01240 336 FunFam NAC domain-containing protein 16 157 - -
Arst5g01240 336 Pfam No apical meristem (NAM) protein 8 137 IPR003441 GO:0003677|GO:0006355
Arst5g01240 336 SUPERFAMILY NAC domain 5 153 IPR036093 GO:0003677|GO:0006355
Arst5g01240 336 ProSiteProfiles NAC domain profile. 7 153 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01240 Arst-Chr5 13172274 13175407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01240 1 335 NAC Transcription Factor Family AT1G12260 52.247 3.73e-114 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst5g01240 NAM 1.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01240 - - ahf:112800892 666.381