Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01236 ATGGCCGACGAAGCTAAAGCCAAAGGCAACGCCGCCTTCTCCTCCGGCGATTACGCCGCGGCCGTACGCCATTTCTCCGACGCCATAGCTCTCTCCCCGGACAACCACGTTTTGTACTCCAACCGATCCGCCTCCTACGCCTCCCTCAAGAAGTACTCCGACGCCTTAGCCGATGCCAAGAAGACGGTGGAGCTCAAGCCCGACTGGTCCAAGGGCTACAGCCGCCTCGGCGCCGCCCACCTCGGCCTCTCCCAATACGACGACGCTATTGCAGCATACAAAAAGGGCCTCGAAATCGACCCCAACAACGAGCCCCTCAAATCCGGCCTGGCTGATGCCCAGGCAGCCGCCTCCAGGGCCCGCTCGGCCCCTGCAAACCCCTTCGGGGACGCCTTCTCAGGGCCAGAGATGTGGGCTCGGCTCACTGCAGACCCAACCACTAGGGTTTATCTTCAGCAGCCGGATTTCGTGAAGATGATGCAGGATATTCAGAAGGATCCAAACAAATTGAACTTGTACTTGAAGGATCAGAGGGTTATGCAGGCCATTGGCGTCTTGCTCAATGTCAAGATTCGAACCCCAACTGATGATGCTGACATGCCAGAGTCCTCTTCTCCTTCTCCTTTCCCTTCCCCCTCCCCCTCCCCCTCCGAGAGGAAGAGGGCGGCTGAAGCGGAGCCTCCAAGGCAGCCCGAACCTGAGCCAGAGCCCGAGCCCATGGACTTGTCGGAGGAGGAGAAGGATAAGAAGCTGAGGAAGGCGGAGGCGCAGAAGCAGAAGGAGGCTGGGAACGCAGCGTACAAGAAGAAGGATTTTGATACAGCTATTCATTATTACTCGAAGGCTTTGGAGTTGGATGATGAGGATATTTCTTATCTCACAAACCGTGCTGCTGTTTACTTGGAAATGGGAAAGTATGAGGAATGCATAAAAGACTGTGATAAGGCTGTTGAAAGAGGAAGAGAACTAAGATCAGACTTCAAGATGATAGCAAGAGCTTTGACCCGGAAAGGAACTGCCTTGGTGAAGATGGCTAAATCCTCAAAGGATTTTGAACCTGCCATCGAGACTTTCCAGAAAGCACTTACAGAACACCGCAACCCAGACACATTGAAGAAACTTAATGAAGCTGAAAAGGCTAAGAAAGATCTAGAACAACAAGAATATTTTGATCCAATATATTAAAGAATGTTTTGGCATGCAGGAAATGAATACTTCAAGCAACAAAAGTATCCCGAGGCTGTGAGGCATTACACAGAGTCTTTGAGGAGAAACCCTAAAGATCCTAGGACTTACAGTAACAGAGCTGCATGCTACACCAAACTAGGGGCCATGCCGGAAGGTTTAAAGGATGCTGAGAAGTGCATTGAGCTGGATCCAACCTTTGTAAAGGGTTATACAAGGAAAGGTGCGGTACAGTTTTTCATGAAGGAATATGACAAGGCTTTGGAAACATATAAGGAGGGATTGAAACACGACCCCAACAATCAGGAGTTACTTGATGGCATTGGAAGATGTGTACAACAAATTAATAAGGCAAGCCGTGGGGATTTAAGTCCCGAAGAATTGAAGGAGAGACAGGCGAAGGCAATGCAAGATCCAGAGATACAGAACATCCTCCAAGACCCAGTAATGAGACAGGTATTGGTTGATTTCCAAGAAAATCCAAAGGCTGCACAGGAACATACGAAGAATCCAATGGTGATGAACAAAATCCAAAAACTCATCAGTGCTGGGATTGTCCAGATGAGGTAG 1755 0.498 MADEAKAKGNAAFSSGDYAAAVRHFSDAIALSPDNHVLYSNRSASYASLKKYSDALADAKKTVELKPDWSKGYSRLGAAHLGLSQYDDAIAAYKKGLEIDPNNEPLKSGLADAQAAASRARSAPANPFGDAFSGPEMWARLTADPTTRVYLQQPDFVKMMQDIQKDPNKLNLYLKDQRVMQAIGVLLNVKIRTPTDDADMPESSSPSPFPSPSPSPSERKRAAEAEPPRQPEPEPEPEPMDLSEEEKDKKLRKAEAQKQKEAGNAAYKKKDFDTAIHYYSKALELDDEDISYLTNRAAVYLEMGKYEECIKDCDKAVERGRELRSDFKMIARALTRKGTALVKMAKSSKDFEPAIETFQKALTEHRNPDTLKKLNEAEKAKKDLEQQEYFDPIYXRMFWHAGNEYFKQQKYPEAVRHYTESLRRNPKDPRTYSNRAACYTKLGAMPEGLKDAEKCIELDPTFVKGYTRKGAVQFFMKEYDKALETYKEGLKHDPNNQELLDGIGRCVQQINKASRGDLSPEELKERQAKAMQDPEIQNILQDPVMRQVLVDFQENPKAAQEHTKNPMVMNKIQKLISAGIVQMR 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01236 584 PANTHER TPR REPEAT CONTAINING PROTEIN 2 556 - -
Arst5g01236 584 FunFam Stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing) 516 584 - -
Arst5g01236 584 Gene3D Tetratricopeptide repeat domain 253 389 IPR011990 GO:0005515
Arst5g01236 584 ProSiteProfiles TPR repeat profile. 463 496 IPR019734 GO:0005515
Arst5g01236 584 Coils Coil 367 387 - -
Arst5g01236 584 ProSiteProfiles TPR repeat profile. 395 428 IPR019734 GO:0005515
Arst5g01236 584 ProSiteProfiles TPR repeat profile. 70 103 IPR019734 GO:0005515
Arst5g01236 584 ProSiteProfiles TPR repeat profile. 256 289 IPR019734 GO:0005515
Arst5g01236 584 Gene3D - 515 584 - -
Arst5g01236 584 Gene3D - 124 191 - -
Arst5g01236 584 FunFam Stress-induced phosphoprotein 1 253 387 - -
Arst5g01236 584 Pfam STI1 domain 525 576 IPR041243 -
Arst5g01236 584 Pfam STI1 domain 135 188 IPR041243 -
Arst5g01236 584 SUPERFAMILY TPR-like 2 114 IPR011990 GO:0005515
Arst5g01236 584 ProSiteProfiles TPR repeat profile. 2 35 IPR019734 GO:0005515
Arst5g01236 584 FunFam Putative stress-induced-phosphoprotein 1 124 192 - -
Arst5g01236 584 MobiDBLite consensus disorder prediction 219 262 - -
Arst5g01236 584 SMART tpr_5 463 496 IPR019734 GO:0005515
Arst5g01236 584 SMART tpr_5 331 368 IPR019734 GO:0005515
Arst5g01236 584 SMART tpr_5 290 323 IPR019734 GO:0005515
Arst5g01236 584 SMART tpr_5 36 69 IPR019734 GO:0005515
Arst5g01236 584 SMART tpr_5 395 428 IPR019734 GO:0005515
Arst5g01236 584 SMART tpr_5 70 103 IPR019734 GO:0005515
Arst5g01236 584 SMART tpr_5 429 462 IPR019734 GO:0005515
Arst5g01236 584 SMART tpr_5 256 289 IPR019734 GO:0005515
Arst5g01236 584 SMART tpr_5 2 35 IPR019734 GO:0005515
Arst5g01236 584 Coils Coil 240 260 - -
Arst5g01236 584 FunFam Stress-induced phosphoprotein 1 1 116 - -
Arst5g01236 584 Gene3D Tetratricopeptide repeat domain 1 116 IPR011990 GO:0005515
Arst5g01236 584 ProSiteProfiles TPR repeat region circular profile. 70 103 - -
Arst5g01236 584 MobiDBLite consensus disorder prediction 194 262 - -
Arst5g01236 584 SUPERFAMILY TPR-like 255 382 IPR011990 GO:0005515
Arst5g01236 584 Gene3D Tetratricopeptide repeat domain 397 514 IPR011990 GO:0005515
Arst5g01236 584 Pfam Tetratricopeptide repeat 7 67 - -
Arst5g01236 584 ProSiteProfiles TPR repeat profile. 429 462 IPR019734 GO:0005515
Arst5g01236 584 SMART CBM 134 173 IPR006636 -
Arst5g01236 584 SMART CBM 533 572 IPR006636 -
Arst5g01236 584 SUPERFAMILY TPR-like 401 507 IPR011990 GO:0005515
Arst5g01236 584 Pfam Tetratricopeptide repeat 71 103 IPR001440 GO:0005515
Arst5g01236 584 Pfam Tetratricopeptide repeat 464 496 IPR001440 GO:0005515
Arst5g01236 584 FunFam hsp70-Hsp90 organizing protein 3-like 398 508 - -
Arst5g01236 584 Pfam TPR repeat 402 443 - -
Arst5g01236 584 Pfam TPR repeat 263 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01236 Arst-Chr5 13058196 13061192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01236 402 506 U-box Gene Family AT3G07370 26.667 5.04e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01236 K09553 - gmx:100816776 926.391