Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01235 ATGGCTGCAAGAGTAGTAAGACATGGAGTTATTCTTGTACTGCCTCTCTTGCTGGCGAGCTTTGTAACTCAGGCAGGTGGAACAACCCCACAAGACTTCATAAAATCTTCATGCAGAGCAACGCGCTACCCTGCTGTCTGCGTGGAATGCCTCATGAGCTACGCAGGCGTGATTGGCCAAAGCAAGAGGCAACTAGCCCTGGCGGCCTTATCAGTGAGCATATCAAGGACACGGTCGTGTTCATCGTTCGTGAAGAAGATGGCGAAGGAGATGAAGATGAAGCCAAGGGAGTTAGGAGCGGTACAGGACTGCATAGAAAACATGGGGGACAGCATAGACAGGCTGAGCCAATCGGTGAGGGAGATGGGGCGCGTGGGTGAAGGAGTGGGAGAGGAATTTGAGTGGCACATGAGCAACGTGCAGACATGGGTGAGTGCTGCACTCACCGACGACAACACATGTCTTGATGGCTTTGGTGGCCGTGCCATGAATGGCAACGTCAAGGCAGCCATTAGAGGCAGGGTCCTCCATGTTGCTCAGCTCACAAGTAACGCCCTCGCTTTGGTTAATCGCTTTGCTTCCACACACTCTCTTCAAACTTCTCCAATCTTAAACTAA 618 0.5194 MAARVVRHGVILVLPLLLASFVTQAGGTTPQDFIKSSCRATRYPAVCVECLMSYAGVIGQSKRQLALAALSVSISRTRSCSSFVKKMAKEMKMKPRELGAVQDCIENMGDSIDRLSQSVREMGRVGEGVGEEFEWHMSNVQTWVSAALTDDNTCLDGFGGRAMNGNVKAAIRGRVLHVAQLTSNALALVNRFASTHSLQTSPILN 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01235 205 NCBIfam pectinesterase inhibitor domain 11 190 IPR006501 GO:0004857
Arst5g01235 205 CDD PMEI-like_3 36 194 - -
Arst5g01235 205 SMART PMEI_2 29 188 IPR006501 GO:0004857
Arst5g01235 205 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 192 IPR035513 -
Arst5g01235 205 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 188 - -
Arst5g01235 205 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 192 IPR035513 -
Arst5g01235 205 FunFam Pectin methylesterase inhibitor 1 29 192 - -
Arst5g01235 205 Pfam Plant invertase/pectin methylesterase inhibitor 32 188 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01235 Arst-Chr5 13052787 13053649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01235 34 195 Carbohydrate Esterase AT3G14310 30.061 2.07e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01235 - - mtr:11427094 250.366