Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01228 ATGAATTCCCTTGGTTTCCTTCTTTTATTGCTTGTTCTGGTTGCATTTTCCATTGTGCAGCTGGTTCATGGAAATGCAGAACTAAGAGCTCTTATGGACTTGAAATCCTCACTAGACCCGGAGGGAAAGATCCTTAGCTCTTGGAGCAGTGATGGTGATCCATGCAGTGGCTTGTTCCAAGGTGTTGCGTGCAATGAGCACCGCAAAGTGGCCAACATTTCCTTGCAGGGAAAGGGACTTTCAGGGTGGTTATCTCCTTCTGTGGCTGAACTTAAATGCTTGTCAGGTTTATACCTTCATTACAACAACCTTTCTGGTGAGATACCCCCACAGATTTCAAATCTTACTGAACTTGTTGATCTCTATCTCGACGTGAATAGTCTCTCCGGAACCATACCTACTGAGATCGGCAACATGGCTAGTCTCCAAGTGGTGCAGTTAGGAGACAACCAATTAGTGGGAAGTATACCTAAACAGATGGGCTCCTTGAAGCAGCTTAGTACTCTTGCATTGCAATATAACAAATTAAGTGGCGAAATTCCACTAAGCTTGGGAAACTTGGAAAAGCTAAGCAGGCTGAATTTGAGCTTTAACAACTTCACTGGTATGATTCCTGCAACATTAGCTCATCTTGAACAACTCAAGGTTCTAGACATTCAAAACAATTCTCTATCAGGGTTTGTTCCTTCAGGATTGAAGAGACTGGGGGATGGATTCCAAGGTGCAAACAACCGAGGTCTATGTGGAGTTGGGTTTTCTACTCTGAGAGCATGCAAGCCTGCGAATGTGAAATTGAATTGTAACCAGACTCATTGCTCAAAATCAAGGAGGTTTCCTCAGGCTGTGATCACAGCAGGTCTTGTGACAATCACACTCACATTCTTCAGCGTTGGATTTCTTACTTTTGTCAAATACCGACGGCAAAAGCAGAGGATTAGGAATACATCAGACTCATCTGAAGGGAAACTTAGTCCTTGCCAGCCTAAAGACTTCATCAGGAAAAGTCCATCTCCACTTGTTAACCTTGAGTATCACAATGGATGGGATCCATTGTCTAACCAAAATCTAAACCAGGTTAGATTTAATGTGGATGAGGTAGAGTCGGCAACGCTGTACTTTTCGGAAGCCAATTTATTGAGTAAGAGCAAATTCTCAGCAGTTTATAAGGGAGTACTCAGAGATGGTTCTCTTGTGGCCATTAGAAGCATTAACTCGACATGCTGCAAAACTGAGGAAGCTGAGTTTGTGAAGGGGCTGACCTTAGTAACCTCACTGAGACATGAAAACCTTGTTAGGCTCAGAGGTTTCTGCTGTTCAAGAAGTAGAGGTGAATGTTTCCTGATCTATGACTTTGCCACCAAGGGAAACCTGTCTCAATATCTTGATATGGAAGATGGAAATGGACATGTGCTTGAATGGCCCAAGAGGGTCTCCATCATCAAGGGCATTGCAAAGGGTATTGGATATTTGCACGGTGATGAAGCAAGCAAACCTTCCCTAGTACATCAGAATATTTCAGTTGAAAATGTTCTCCTTGACCAGCAGTTCAATCCGTTGATCATGGATGCTGGGCTCCCCAAGCTTCTTGCAGATGACGTTGTTTTCTCAGCTCTGAAAGTAAGTGCCGCCATGGGGTACCTGGCCCCTGAATACGTTACTACAGGACGCTTCACTGAGAAGAGTGACATCTATGCATTTGGTGTCATTGTTCTTCAAGTTCTGTCTGGGAAGAAAACTGTAGGTGGTTCGATACGGTTGGCAGTTGAGTCTCTAAGATTTGATGATTTTGTTGACAGAAATCTGAGGGGAAGATACTCCAAACATGAGGCAACAATGCTTTCAAAGCTTGCAACTCTCTGCACCCATGAGCTTCCTGACCAAAGGCCAACCATGGTGGATGTGATTCAAGAACTGAATGTGTTTCCTGCTAATTCATGA 1938 0.4376 MNSLGFLLLLLVLVAFSIVQLVHGNAELRALMDLKSSLDPEGKILSSWSSDGDPCSGLFQGVACNEHRKVANISLQGKGLSGWLSPSVAELKCLSGLYLHYNNLSGEIPPQISNLTELVDLYLDVNSLSGTIPTEIGNMASLQVVQLGDNQLVGSIPKQMGSLKQLSTLALQYNKLSGEIPLSLGNLEKLSRLNLSFNNFTGMIPATLAHLEQLKVLDIQNNSLSGFVPSGLKRLGDGFQGANNRGLCGVGFSTLRACKPANVKLNCNQTHCSKSRRFPQAVITAGLVTITLTFFSVGFLTFVKYRRQKQRIRNTSDSSEGKLSPCQPKDFIRKSPSPLVNLEYHNGWDPLSNQNLNQVRFNVDEVESATLYFSEANLLSKSKFSAVYKGVLRDGSLVAIRSINSTCCKTEEAEFVKGLTLVTSLRHENLVRLRGFCCSRSRGECFLIYDFATKGNLSQYLDMEDGNGHVLEWPKRVSIIKGIAKGIGYLHGDEASKPSLVHQNISVENVLLDQQFNPLIMDAGLPKLLADDVVFSALKVSAAMGYLAPEYVTTGRFTEKSDIYAFGVIVLQVLSGKKTVGGSIRLAVESLRFDDFVDRNLRGRYSKHEATMLSKLATLCTHELPDQRPTMVDVIQELNVFPANS 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01228 645 FunFam Protein NSP-INTERACTING KINASE 2 24 173 - -
Arst5g01228 645 Gene3D Phosphorylase Kinase; domain 1 341 451 - -
Arst5g01228 645 SUPERFAMILY Protein kinase-like (PK-like) 348 639 IPR011009 -
Arst5g01228 645 ProSiteProfiles Protein kinase domain profile. 373 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g01228 645 SMART LRR_typ_2 211 234 IPR003591 -
Arst5g01228 645 SMART LRR_typ_2 139 163 IPR003591 -
Arst5g01228 645 SMART LRR_typ_2 91 115 IPR003591 -
Arst5g01228 645 SMART LRR_typ_2 187 210 IPR003591 -
Arst5g01228 645 Gene3D Ribonuclease Inhibitor 174 244 IPR032675 -
Arst5g01228 645 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Arst5g01228 645 FunFam Protein NSP-INTERACTING KINASE 2 452 642 - -
Arst5g01228 645 Gene3D Ribonuclease Inhibitor 24 173 IPR032675 -
Arst5g01228 645 SUPERFAMILY L domain-like 27 233 - -
Arst5g01228 645 FunFam Protein NSP-INTERACTING KINASE 2 346 451 - -
Arst5g01228 645 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 157 640 IPR046959 -
Arst5g01228 645 Pfam Leucine rich repeat 189 234 IPR001611 GO:0005515
Arst5g01228 645 Gene3D Transferase(Phosphotransferase) domain 1 453 641 - -
Arst5g01228 645 Pfam Protein tyrosine and serine/threonine kinase 378 638 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01228 Arst-Chr5 12963779 12966460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01228 1 486 Miscellaneous Gene Families AT4G22730 55.827 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Arst5g01228 PK_Tyr_Ser-Thr 5.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01228 - - adu:107488203 1264.6