Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01210 ATGGAGGGTAGAGACATGGTTAGTGGGGTTACGGTGGTGGGATCCGATGGTCCGTCGGGCTACCATGCTGCTCCCAGGAACGACAATCCAGCTCCGGCGGGGGGATCCGCCGTGGCCATGCCGGGAACGCAGGTGGGTGTTCCGCTGCAGCAGCAGCAGGCGGCGGTTGCAGCGGTGGCGGAGAAGAAGAAGAGGGGTCGACCCAGGAAGTACGCAGCAGACGGGTCGGTTACTATGGCAATGTCTCCGAAGCCGATTTCTTCTTCGGGTCTGCCGGCGATGATCGATTTCTCTTCGGGAAAGCGCGGGAAAGTGCGGCCACCTGGCTCTGTCAGCAAAGCCAAGTTCGAGGCGAGTGGGTTGGATGCTCGTCAATCGGTGCTAATTTTACCCCCCCATTTCATCACTGCTAATTCCGGGGAGATAATATCGTTTTCTCAGCAAGGACCACGAGCTATATGTATTCTTTCTGCAAATGTAGTCATATCAAGTGTGACACTTCGTCAACCTGATTCTTCCGGAGGTACACTGACATACGAGGGACGGTTTGAGATTCTGTCTTTGAGCGGATCATTCATGCCAAATGATAATGGTGGAACACGGAGCAGATCCGGTGGCATGAGTATTTCCTTAGCAAGTCCGGATGGACGTGTTGTAGGCGGCGGAGTAGCTGGTCTATTGGTTGCTGCAAGTCCTGTGCAGGTAGTGGTAGGCAGTTTTCTCGCAGGCAAGCAACAGCAATCAAACCACAAAAAGCAGAAATTTGAGGTAATATCAACAGCCACGCCACCCGCTGCAGCCGCTGCTCATGCTAATCTCTCAACTTGCTCTTCCTGGAGTAACCCAACTGATATCAGTGTGTCATTTCCTGGAGGCTAG 879 0.537 MEGRDMVSGVTVVGSDGPSGYHAAPRNDNPAPAGGSAVAMPGTQVGVPLQQQQAAVAAVAEKKKRGRPRKYAADGSVTMAMSPKPISSSGLPAMIDFSSGKRGKVRPPGSVSKAKFEASGLDARQSVLILPPHFITANSGEIISFSQQGPRAICILSANVVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNDNGGTRSRSGGMSISLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGKQQQSNHKKQKFEVISTATPPAAAAAHANLSTCSSWSNPTDISVSFPGG 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01210 292 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 37 266 IPR039605 GO:0003680
Arst5g01210 292 Gene3D - 139 262 - -
Arst5g01210 292 CDD DUF296 132 217 IPR005175 -
Arst5g01210 292 Pfam Plants and Prokaryotes Conserved (PCC) domain 141 240 IPR005175 -
Arst5g01210 292 SUPERFAMILY AF0104/ALDC/Ptd012-like 141 254 - -
Arst5g01210 292 ProSiteProfiles PPC domain profile profile. 118 261 IPR005175 -
Arst5g01210 292 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01210 Arst-Chr5 12733314 12735404 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01210 9 278 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 54.369 3.82e-87 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01210 - - adu:107488108 527.324