Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01203 ATGGATCCAATTACAGCACACGGCCATTCACTTCCACCACCATTCCACACAGCAAGAGATCTGTTGCACCACCACCAGCAACAGCAGCAGCAGCATGGAAAAGACGGAACACCTGGAGGAGGAGGAGGAGGATCCGGTGAAACCGAAATGACAAGAAGACCAAGAGGAAGACCAGCTGGATCCAAGAACAAACCCAAGCCACCGATCATCATCACCCGCGACAGTGCCAATGCCCTAAAGACGCACGTCATGGAGGTTGCAGACGGTTGCGACATCGTTGAGAGCGTCTCAAACTTCGCAAGGAGGCGCCAAAGAGGGGTTTGCATCATGAGCGGCACCGGCACCGTCACCAACGTCACACTCCGCCAACCAGCTTCCTCTGGAGCCGTCGTCTCCCTCCATGGAAGGTTCGAGATCTTGTCCCTGGCGGGATCCTTCCTCCCTCCTCCCGCTCCACCTGCGGCCTCCGGCTTGACCATATATCTAGCCGGAGGGCAAGGGCAGGTGGTCGGAGGGAGTGTGGTGGGGACACTGATTGCTTCCGGCCCGGTGGTCATCATGTCCGCTTCCTTCAGCAACGCTGCGTATGAGAGACTTCCTTTGGAGGAAGAGGACCCTTCCATGCCCTTGCAAGGGTCTGGCGGTGGCGGCGGCGGCTCAATCGGGTCCCCCGGTGGTGGTCAGCAGCATGCGCAGCAGCAGCAACAGCAGCAGATGTTAGGAGACGCAACTGCTCCACTCTTCCATGGTTTGAATCCGAATCTTCTGAATTCAGTTCAGATGCCAACGGAAGCTTTCTGGAATACTCCTGGTCGCTCTCCTTATTGA 828 0.5725 MDPITAHGHSLPPPFHTARDLLHHHQQQQQQQXGKDGTPGGGGGGSGETEMTRRPRGRPAGSKNKPKPPIIITRDSANALKTHVMEVADGCDIVESVSNFARRRQRGVCIMSGTGTVTNVTLRQPASSGAVVSLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGTLIASGPVVIMSASFSNAAYERLPLEEEDPSMPLQGSGGGGGGSIGSPGGGQQHAQQQQQQQMLGDATAPLFHGLNPNLLNSVQMPTEAFWNTPGRSPY 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01203 276 Gene3D - 80 208 - -
Arst5g01203 276 ProSiteProfiles PPC domain profile profile. 77 214 IPR005175 -
Arst5g01203 276 FunFam AT-hook motif nuclear-localized protein 80 207 - -
Arst5g01203 276 CDD DUF296 81 148 IPR005175 -
Arst5g01203 276 Pfam Plants and Prokaryotes Conserved (PCC) domain 81 194 IPR005175 -
Arst5g01203 276 SUPERFAMILY AF0104/ALDC/Ptd012-like 77 207 - -
Arst5g01203 276 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 28 269 IPR014476 GO:0003680
Arst5g01203 276 PIRSF ESCAROLA 5 275 IPR014476 GO:0003680
Arst5g01203 276 MobiDBLite consensus disorder prediction 1 73 - -
Arst5g01203 276 MobiDBLite consensus disorder prediction 199 247 - -
Arst5g01203 276 MobiDBLite consensus disorder prediction 226 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01203 Arst-Chr5 12500128 12501958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01203 48 271 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 70.130 3.78e-83 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01203 - - gmx:100781436 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01203 5 12500128 12501958 Arst5g01203 5 12500128 12501958 ECH