Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01199 ATGAGAAAACACCGCCAAATTAACCTCTTTCATGCTCTGTTATGCTCCATTCTCTTCTTGGTTTCTTGTGTAACGGTATCACCAGCCACTGAGAGAGAGATTCTGCAACAATTCAAGGGCAACATCACAGAGGACCCTTTCAACAGCTTGAGTTCATGGGTTTCCAGTGGAAACCCCTGCCAAGATTACAGAGGTGTTTTCTGCAACGATGAAGGTTCTGTGGAAAGAATCATTCTTTGGAACACTAGCTTGGCTGGGGTGTTGTCTCCAGCATTGTCTGGTTTGAAGAGGTTGAGGACATTGACATTGTTTGGGAACCGGTTCAAGGGTAACATCCCAGATGATTATGCTGATCTTCACACATTGTGGAAGATCAATTTGAGCTCCAATGCGTTATCTGGTTCAATCCCAGAGTTCATTGGTGATTTGCCAAACATTCGGTTTCTAGATTTGTCCAAGAATGGCTTCACTGGGGAGATACCTTCAGCCTTGTTCAGGTACTGTTACAAAACCAGGTTTGTGTCTCTTTCTCATAACAACCTTGCTGGTCCAATTCCTGTGTCATTGGAGAATTGCTCCAACCTTGAAGGATTTGATCTTTCTTACAATAATCTGACCGGTGCTGTCCCTTCGCGGCTTTGTGATATTCCGAGCTTGTCATATGTGTCACTGAGAAGCAATGCCTTATCAGGGAGTGTGAAAGGTCTCATATCACCTTGCCGGAGCTTGAAACATTTGGATTTCGGTAGTAATATGTTCACAGATTTGGCTCCATTCAGCATCCTTGAAATGCAAAATCTTACTTATTTCAATATATCATATAATAGGTTTGGAGGAAATATTTCTGAGATCACAACCTGTAGTGAGAGATTAGAATTCTTTGATGGTTCCGGGAATGATTTGGATGGAGAATTTCCCTCCAGCATAATTAGATGCAAGAACCTAAAGCTCTTGGCCTTGGAGTTGAATAGGCTGAAAGGGAGTATCCCAGTTGATATTCAGGAATTGCAAAAATTTCTTCTCAGTTGTGAGTTCCTTAACTTTCTCAAACTGACATATACATTAAACTTGATCTTATGGATTACATCTGAGTTCATTCTTTCATGTTGCTGCAGGGACCTTTCTGGTAATAGCTTAGAGGGTGAGATTCCTCAGACCCTATACAACATGACATACTTGGAATCCCTCGACTTACATCAGAACCGGCTCAATGGAAGCATACCACCAAGCCTAGGAAACCTGTCAAAGTTGCAATACCTAGATCTGTCACATAATTCACTATCTAGTTTAATCCCATCTTCTCTTGGAAATTTAGGAAACATGACTCATTTTGATCTTTCATTCAACAATCTATCCGGTCTCATCCCTCAAATTGAAACCATACAGCGTTTTGGTCCATCTGCTTTTTCCAATAATCCTTTTCTCTGTGGTGCTCCTTTGGACACCTCTTGCTCGGCGAATGGAACTCCGTCACCTTCAGCACCTGGGAAGACTAAAGTTCTAAGCATCTCAGCAATTGTTGCGATTGTTGCTGCAGCTCTGATCCTTGCAGGGGTTTGTTTGGTAACCATCATGAATATTAGGGCTCGTCGTCGAAAAAAAGACAGTGATGAGATCATGGTTGTTGAGAGCACACCCCTTGGATCATCAACAGAATCAAATGTTATAATTGGAAAGCTGGTTCTGTTTAGCAAAAGTTTACCATCAAAATATGAAGATTGGGAGGCAGGTACAAAAGCATTGCTTGACAAAGAGTCTATAATAGGTGGTGGATCAATTGGAACAGTGTACAGAACTGATTTTGAAGGCGGCATCTCAATTGCAGTGAAGAAGCTTGAGACTTTGGGAAGGATCCGAAACCAGGAAGAATTCGAGCACGAGATTGGACGATTAGGCAACCTCCAACACCCAAATTTGGTTTCTTTACAAGGTTACTATTGGTCCTCTTCAATGCAATTGATTCTATCAGAGTTTGTCCCTAATGGGAATCTCTATGATAATCTACATGGGATTGGATATCCCGGAACAAGCACTAGCAGTAGCAACAGGGAGTTATATTGGTTTAGAAGGTTCCAAATCGCACTTGGTACTGCAAGAGCACTCGCCTATCTTCACCATGACTGCAAACCTCCAATTCTTCATCTCAACATTAAATCCTCTAACATACTCTTAGATCACAAGTATGAGGCTAAGTTGTCTGACTATGGTTTAGGAAAGTTGCTCCCCATTTTGGACAATTACGGTCTGACCAAGTTCCACAATGTCGTTGGCTATGTCGCACCAGAATTGGCTCAAAGCCTAAGGCAGAGTGAGAAGTGTGATGTGTACAGTTTTGGGGTGATTCTTTTGGAGCTGGTTACAGGTAGGAAGCCAGTAGAAAGTCCAACAACAAGTGAGGTGGTCATCTTATGTGAATATGTAAGAAGTTTGTTAGAGGTTGGTTCAGCTTCAAATTGCTTTGACAGAAACTTATTGGGATTTGCTGAGAATGAGTTAATTCAGGTTATGAAGTTGGGACTAATTTGTACCTCGGAGGATCCATTAAGGAGACCAAGCATGGCTGAGGTTGTCCAGGTCCTTGAGTCCATTAGAAATGGATTGGGAGCACACTAA 2613 0.4198 MRKHRQINLFHALLCSILFLVSCVTVSPATEREILQQFKGNITEDPFNSLSSWVSSGNPCQDYRGVFCNDEGSVERIILWNTSLAGVLSPALSGLKRLRTLTLFGNRFKGNIPDDYADLHTLWKINLSSNALSGSIPEFIGDLPNIRFLDLSKNGFTGEIPSALFRYCYKTRFVSLSHNNLAGPIPVSLENCSNLEGFDLSYNNLTGAVPSRLCDIPSLSYVSLRSNALSGSVKGLISPCRSLKHLDFGSNMFTDLAPFSILEMQNLTYFNISYNRFGGNISEITTCSERLEFFDGSGNDLDGEFPSSIIRCKNLKLLALELNRLKGSIPVDIQELQKFLLXSCEFLNFLKLTYTLNLILWITSEFILSCCCRDLSGNSLEGEIPQTLYNMTYLESLDLHQNRLNGSIPPSLGNLSKLQYLDLSHNSLSSLIPSSLGNLGNMTHFDLSFNNLSGLIPQIETIQRFGPSAFSNNPFLCGAPLDTSCSANGTPSPSAPGKTKVLSISAIVAIVAAALILAGVCLVTIMNIRARRRKKDSDEIMVVESTPLGSSTESNVIIGKLVLFSKSLPSKYEDWEAGTKALLDKESIIGGGSIGTVYRTDFEGGISIAVKKLETLGRIRNQEEFEHEIGRLGNLQHPNLVSLQGYYWSSSMQLILSEFVPNGNLYDNLHGIGYPGTSTSSSNRELYWFRRFQIALGTARALAYLHHDCKPPILHLNIKSSNILLDHKYEAKLSDYGLGKLLPILDNYGLTKFHNVVGYVAPELAQSLRQSEKCDVYSFGVILLELVTGRKPVESPTTSEVVILCEYVRSLLEVGSASNCFDRNLLGFAENELIQVMKLGLICTSEDPLRRPSMAEVVQVLESIRNGLGAH 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01199 871 PRINTS Leucine-rich repeat signature 415 428 - -
Arst5g01199 871 PRINTS Leucine-rich repeat signature 394 407 - -
Arst5g01199 871 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 660 870 - -
Arst5g01199 871 CDD STKc_IRAK 589 864 - -
Arst5g01199 871 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 169 257 - -
Arst5g01199 871 Gene3D Ribonuclease Inhibitor 169 258 IPR032675 -
Arst5g01199 871 Gene3D Ribonuclease Inhibitor 28 168 IPR032675 -
Arst5g01199 871 PANTHER OS05G0588300 PROTEIN 210 339 - -
Arst5g01199 871 Gene3D Ribonuclease Inhibitor 259 488 IPR032675 -
Arst5g01199 871 SUPERFAMILY Protein kinase-like (PK-like) 584 862 IPR011009 -
Arst5g01199 871 ProSiteProfiles Leucine-rich repeat profile. 417 438 IPR001611 GO:0005515
Arst5g01199 871 FunFam Putative LRR receptor-like serine/threonine-protein kinase 560 659 - -
Arst5g01199 871 Gene3D Transferase(Phosphotransferase) domain 1 660 868 - -
Arst5g01199 871 SUPERFAMILY L domain-like 73 163 - -
Arst5g01199 871 ProSiteProfiles Protein kinase domain profile. 583 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g01199 871 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 290 489 - -
Arst5g01199 871 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Arst5g01199 871 SMART LRR_typ_2 391 414 IPR003591 -
Arst5g01199 871 SMART LRR_typ_2 415 438 IPR003591 -
Arst5g01199 871 SMART LRR_typ_2 439 462 IPR003591 -
Arst5g01199 871 SMART LRR_typ_2 143 167 IPR003591 -
Arst5g01199 871 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Arst5g01199 871 Pfam Leucine rich repeat 393 452 IPR001611 GO:0005515
Arst5g01199 871 Pfam Leucine rich repeat 174 229 IPR001611 GO:0005515
Arst5g01199 871 Pfam Protein kinase domain 585 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g01199 871 SUPERFAMILY L domain-like 168 481 - -
Arst5g01199 871 Gene3D Phosphorylase Kinase; domain 1 551 659 - -
Arst5g01199 871 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g12460 28 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01199 Arst-Chr5 12404226 12407785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01199 30 868 Receptor kinase-like Gene Family AT1G62950 63.876 0.0 1048
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Arst5g01199 Pkinase 3.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01199 - - gmx:100800970 1335.47