Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01190 ATGAAGGAGATGATATATAGAGCTGCGGCATTTCGGCCTGTGAACTTGGGATTAGAGGTTGCGAAGAAGCCGAAGAGGAAGAACGTGAAGATATCAAGCGATCCTCAAACGTGTGGCCTTTTGGAAGACGCCCCAAAATTGTTCGACGAAATTTTCCAAAGGAATGTGGTGTCTTGGACTTCAATTATTGCCGGGTATGTCCAAAATAGTTGCACTGCTGAGGACATTCGCTTCTTTAAGGAGCTGTTAGTTGAGGAGATTGAGAATGCAGGGTGTGTTCAGGAGGAGGGGATGGTTTTGTGGATCCAATAG 312 0.4583 MKEMIYRAAAFRPVNLGLEVAKKPKRKNVKISSDPQTCGLLEDAPKLFDEIFQRNVVSWTSIIAGYVQNSCTAEDIRFFKELLVEEIENAGCVQEEGMVLWIQ 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01190 103 Gene3D Tetratricopeptide repeat domain 36 97 IPR011990 GO:0005515
Arst5g01190 103 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 1 37 IPR045843 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01190 Arst-Chr5 12349492 12351764 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01190 1 51 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 64.706 2.09e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01190 - - adu:107488101 209.534