Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01159 ATGGAAGCTTCGTTGGAAGGCTCCAGGATGTTCTTGGCAAAGCTTCTTATGACTATATACAGTAAGGAATGCTTGAAATTAAAGCTCGGCTCAACCTTGGAAGAATTGATAAGGGAGGAGGAGAAGAAAAAAGAGAAAATCAACAGGAAGGACTATTGGTTGCGTGAGGGAATCATTGTTAAGGTTATGAGCAAGGCCTTGGCAGAGAAGGGGTACTACAAGCAAAAGGGTGTGGTGAGAAAGGTGATTGACAAATATGTTGGGGAAATTGATATGCTTGAAAGCAAGCATGTGCTGAGAGTCGATCAGGAAGAGCTTGAAACTGTGATTCTACAAGTTGGGGGCCGTGTAAAAATTGTCAATGGTGCATATCGTGGATCAACTGCGAAACTTTTGGGAGTGGATACGGATCATTTTTGTGCAAAGGTGCAGATAGAGAGAGGTGCCTATGATGGCAGGGTACTCAAAGTTGTGGAATATGAAGACATTTATAAAATAGCACAATGA 507 0.4221 MEASLEGSRMFLAKLLMTIYSKECLKLKLGSTLEELIREEEKKKEKINRKDYWLREGIIVKVMSKALAEKGYYKQKGVVRKVIDKYVGEIDMLESKHVLRVDQEELETVILQVGGRVKIVNGAYRGSTAKLLGVDTDHFCAKVQIERGAYDGRVLKVVEYEDIYKIAQ 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01159 168 Pfam KN17 SH3-like C-terminal domain 49 102 IPR041330 -
Arst5g01159 168 SMART kow_9 110 137 IPR005824 -
Arst5g01159 168 CDD KOW_KIN17 113 166 IPR041995 -
Arst5g01159 168 Gene3D - 57 110 - -
Arst5g01159 168 FunFam DNA/RNA-binding protein KIN17, putative 112 167 - -
Arst5g01159 168 FunFam DNA/RNA-binding protein kin17-like 57 110 - -
Arst5g01159 168 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 28 166 IPR037321 -
Arst5g01159 168 Gene3D - 112 167 IPR014722 -
Arst5g01159 168 Coils Coil 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01159 Arst-Chr5 11943384 11946660 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01159 31 167 C2H2 Transcription Factor Family AT1G55460 80.292 1.19e-67 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01159 K13102 - adu:127744908 233.802