Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01155 ATGTTGGCTGGGTGTTCTAGTTCTACATTGTTGTCACCAAGGCATAGATTGAGGAGCGAACCATCACCACAGTTTCATCATCAAGCTTGTCATCTTCAGCTACCACCTTCCATGAGCACGCAGAGATTGGACTTGCCAGCTTGCACCTTCCCAAGGAACAACAAAGTCTCACCAAGGCCTTCTGTTGTCACCACCAACACCAACACCAACAAGCCCATTGAAGCCAAGACAAGCTCTTATTCTCTCAAGCAGCACATTAGGCTTCCGCCATTGGCAACCACACCACAACTTATCACATCTGCACCACCTTCACCCTTCCTTGAAGCCAAAGAAGAGCCCTTCTGGGACAACAACAACAACAACAGGAGCTTGAAGAAGAGGCCAGTGGATAATGACGACTCTTTTGACAGCAGAGCCAAGAGGAAGAAGGGTAGCAACAGCAACAGCAACAGCACCAGCGACAATGGCGATTCTTCCGATGATGTTATGGAAGAAGAAGGAACAGGAGAGGGTCTGAGTTTATCTGCAAACTTCTGGTTACAGCCATCTTCACTTCCTCCATTCTCTCTAACATGTTCAGGGGAGGAAGAGAGGGTGTGCTTCGTTCCAAGCGAGGTGGTTTCCGCTCCTTGGGTGGAATCCGCAATAACAAAGATAACAAACCATGGCGAGAAGGAAGGCGAGGGTGGTGGCAGCCGCTTCCCTCCGCCACAACCCTCAGCCTCCTCCAACACCTCATCAGAGAGCCAAGGTTTAAGCCTCAGGCTGAACGAGAATCCTGAAGTCGGAAACGGTTCAGGTAACCCTTACCATAACCACCACCATGAAGAAACCACCGCGGAGGAAGACGAAGATATCCAAGAGGAGCACCGTGGATTCGAGCTTGTTAGTTTACTAACCGCATGCGTTGAAGCCATTGGAACAAAGAACATCGCCGCAATCAACCATTTCATAGCAAAATTAGGAGATCTTGCTTCACCAAGAGGAACAAGTTCAATGAGCCGAATCTGTTCTTACTTCACAGAAGCCCTAGCCATAAGAGTGACGAGGCTATGGCCTCACATTTTCCACATCACCATCCCTCGGGAGCTCGATCGTGTTGTGGAAGACGAAAACGGCACCGCATTGAGGCTCTTGAACCAAATCACACCGATCCCTAAGTTCCTTCACTTCACATCCAACGAGATGCTGCTGAGAGCCTTCGAAGGCAAAGACAGAGTCCACATCATAGATTTCGACATCAAGCAAGGTCTTCAATGGCCGAGCTTGTTCCAGAGCTTGGCTTCCAGATCGAACCCTCCCAGCCACGTCAGAATCACCGGCATCGGCGAATCCAAGCAAGATCTGAACGAAACAGGTGACAGGCTCGCCGGTTTCGCGGAGGCGTTGAACCTTCCGTTCGAGTTCCATGGAGTGGTGGACAGGCTGGAAGACGTGAGGCTGTGGATGCTTCACGTGAAGGAGAACGAAACGGTTGCGGCGAACTGTGTGTTCCAGCTTCACAAGACTCTGTACGACGTAAACGGCGGAGCGTTGAGAGATTTTTTGGGACTGATACGAAGCACGAACCCCGCAATGGTGGTTGTGGCGGAGCAAGAAGCAGAGCACAACGATATGAGGTTGGAGGCTAGGGTTTGCAACTCGTTGAAATACTACTCAGCGTTGTTTGACTCGGTTGAGCACTGTCTTGAAGGGGATAGCAGTGCGAGGAGGAAGATAGAGGAGATGTTTGGAAGGGAGATTAGGAACATTGTGGCTTGTGAGGGGAGTGATAGGTTGGAGAGGCATGAGGGTTTTGGGAAGTGGAGGAAGATGATGGTGGAGCAAGGAGGGTTCAGGTGCTTGGGTGTTACTGAGAGAGAAAGGGTTCAGAGCCAGTTGCTGATGAAGATGTACCCTTGTGACAGTTACAGTGTTAGGAATCATTCAAGTGAGGCTCTCAGTCTTTGTTGGATGGACATTCCTTTGTTCACTGTTTCAGCTTGGGCACCTCTTGATGCTGCAGGAACCTCTTCATCTGTTTCTCAGCCAATTTGA 2037 0.5012 MLAGCSSSTLLSPRHRLRSEPSPQFHHQACHLQLPPSMSTQRLDLPACTFPRNNKVSPRPSVVTTNTNTNKPIEAKTSSYSLKQHIRLPPLATTPQLITSAPPSPFLEAKEEPFWDNNNNNRSLKKRPVDNDDSFDSRAKRKKGSNSNSNSTSDNGDSSDDVMEEEGTGEGLSLSANFWLQPSSLPPFSLTCSGEEERVCFVPSEVVSAPWVESAITKITNHGEKEGEGGGSRFPPPQPSASSNTSSESQGLSLRLNENPEVGNGSGNPYHNHHHEETTAEEDEDIQEEHRGFELVSLLTACVEAIGTKNIAAINHFIAKLGDLASPRGTSSMSRICSYFTEALAIRVTRLWPHIFHITIPRELDRVVEDENGTALRLLNQITPIPKFLHFTSNEMLLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRSNPPSHVRITGIGESKQDLNETGDRLAGFAEALNLPFEFHGVVDRLEDVRLWMLHVKENETVAANCVFQLHKTLYDVNGGALRDFLGLIRSTNPAMVVVAEQEAEHNDMRLEARVCNSLKYYSALFDSVEHCLEGDSSARRKIEEMFGREIRNIVACEGSDRLERHEGFGKWRKMMVEQGGFRCLGVTERERVQSQLLMKMYPCDSYSVRNHSSEALSLCWMDIPLFTVSAWAPLDAAGTSSSVSQPI 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01155 678 MobiDBLite consensus disorder prediction 1 15 - -
Arst5g01155 678 MobiDBLite consensus disorder prediction 50 170 - -
Arst5g01155 678 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 244 658 IPR005202 -
Arst5g01155 678 MobiDBLite consensus disorder prediction 236 266 - -
Arst5g01155 678 MobiDBLite consensus disorder prediction 1 27 - -
Arst5g01155 678 Pfam GRAS domain family 295 662 IPR005202 -
Arst5g01155 678 ProSiteProfiles GRAS family profile. 286 663 IPR005202 -
Arst5g01155 678 MobiDBLite consensus disorder prediction 222 288 - -
Arst5g01155 678 MobiDBLite consensus disorder prediction 270 288 - -
Arst5g01155 678 MobiDBLite consensus disorder prediction 123 143 - -
Arst5g01155 678 MobiDBLite consensus disorder prediction 54 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01155 Arst-Chr5 11927172 11931398 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01155 1 662 GRAS Transcription Factor Family AT1G63100 55.794 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Arst5g01155 GRAS 3.2e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01155 - - lang:109333178 845.114