Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01149 ATGGGTAAGGCAACAAAATGGTTTCGCGGGCTTTTTGGTCTCAGAAGGTCTTCTGACTCTGCACCACCACCCTCTACCGCCGCTCCAAAACCACACAAAGACAAACGCCGTTGGAGCTTCGTTAATTCTTACAGAGAGAATAAGAACCTCCACCAACATCGCCATCAAGTACGACTCCATGCTTCTTCTGCTCATGACCCTGGGCAGCCGTTAAGATTCAGGCGGCGTTTCGAGGCTGTTTGGCAAGGAGAGCACTAAGAGCCTTAAAAGGATTGGTGAAGCTGCAAGCGTTGGTGAGAGGTCACATTGAGAGGAAGCGCACTGCACAGTGGCTGCAAAGAATGCAAACTCTCTTACGAGCTCAGGCCCGTGCCCGTGCCTGCCGGGCCCAAATTTTGCAGGCCCCTCACTTCCATGTTCCAGCAACACCAGAGAAATTTGAAACACCAGTCCGTTCTTCCAGCATGGAATATAATCACTCGCCATCAGTACTCAAGAGAAATGGTTCTAGATCCCATGTCACCATTGGCAATCGAGAGATAGAACGATCGTGGACGCAACGAAGATCATGGACAAGGACTTGTAGCATGGATGATGAAAGAAGCGCGGGGATTTTCGAAATTGACTCTGGAAAAGCACACAAAAATTCGAAACGCGGAAATCTCTTCGACTCGACGAGTCAGCCATTGGTTTCAGATCATTACAGGCAGAGTTTCGCCACCACAAGGGACTCAACATCTCATCAATCGGGTCATAGTCCATATTCCTGTGAAGTTGAGGAGAATTCAGTGTGTGATGCTGTCAATTTTACTTATACTCCCACAAAGAGTGACGGCTCTAATAGAAGCTACCTAAGTAGTGGTTGTTGTGAGTACTATCCAAGTTACATGGCTTACACTGAATCTTCCAAAGCCAAGGTAAGATCTTTGAGTGCACCAAAACAAAGACTCCAATATGAGAGGTGTGGTTCATTCAATAGGTTCTCGCAAACACAAAGGGTATCATCTACAATGCGTGCAAGCTTCACTAGCAAAGCCTATCCAGGTTCTGGGCATTTGGACAACCTTGGATTGCCCCTCGGATATAGATACTGA 1094 0.4735 MGKATKWFRGLFGLRRSSDSAPPPSTAAPKPHKDKRRWSFVNSYRENKNLHQHRHQVRLHASSAHDPAIEVVAAAGLKSSGSGSGGRSAVSREEWAAVKIQAAFRGCLARRALRALKGLVKLQALVRGHIERKRTAQWLQRMQTLLRAQARARACRAQILQAPHFHVPATPEKFETPVRSSSMEYNHSPSVLKRNGSRSHVTIGNREIERSWTQRRSWTRTCSMDDERSAGIFEIDSGKAHKNSKRGNLFDSTSQPLVSDHYRQSFATTRDSTSHQSGHSPYSCEVEENSVCDAVNFTYTPTKSDGSNRSYLSSGCCEYYPSYMAYTESSKAKVRSLSAPKQRLQYERCGSFNRFSQTQRVSSTMRASFTSKAYPGSGHLDNLGLPLGYRY 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01149 391 MobiDBLite consensus disorder prediction 15 35 - -
Arst5g01149 391 MobiDBLite consensus disorder prediction 176 196 - -
Arst5g01149 391 PANTHER IQ-DOMAIN 5-RELATED 1 358 - -
Arst5g01149 391 SMART iq_5 92 114 IPR000048 GO:0005515
Arst5g01149 391 SMART iq_5 115 136 IPR000048 GO:0005515
Arst5g01149 391 Gene3D - 94 135 - -
Arst5g01149 391 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
Arst5g01149 391 Pfam IQ calmodulin-binding motif 120 134 IPR000048 GO:0005515
Arst5g01149 391 Pfam IQ calmodulin-binding motif 95 114 IPR000048 GO:0005515
Arst5g01149 391 Pfam Protein of unknown function (DUF4005) 293 366 IPR025064 -
Arst5g01149 391 ProSiteProfiles IQ motif profile. 93 121 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01149 Arst-Chr5 11807463 11810581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01149 94 391 IQD Protein Family AT4G23060 40.000 1.01e-45 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01149 - - gmx:100814244 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g02242 1 59500005 59510478 Arst5g01149 5 11807463 11810581 PCT