Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01138 ATGGAACAACAACAACAACATTCATCATCAGCAAACAGCAACAACAACAACAATGGTACTAGTAGTCATATGAACAGTGGTAGCAGGCAAAGCAGCACAAGGTGGACACCAACAACGGATCAGATAAGGATATTGAAGGATTTATACTACAACAATGGAGTAAGGTCTCCAAGTGCAGAACAGATTCAGAGGATCTCTGCTAGGCTTAGACAGTATGGTAAGATTGAAGGCAAGAATGTCTTCTACTGGTTCCAGAATCACAAGGCCCGTGAGAGGCAGAAGAAGAGGTTCACTTCTGATTCTACTACTACTACCAATGTCAATAATCTTCCACTTCCAACCATGCATAGAGGATCCACCATTAACAACAACAACAATGCTCCTAATTGTTGGAATAAACCTACTGAAGACATTACTACTACTACTACCTTTCATAGCAACAAGTATTACTCCAACAATATGCCATCATCAACTGGGATTGCTTCTTCTTCTTCTTCTTCTGCTGGGATGGTTGGTGTGGGCCAGATGGGGAATTATGGCTGTGGATCTGTTCCCATGGAGAAGAGTTTTAGGGAGTGTACAATATCTGCAGGTGGAGGAAGCAGTGTTGGTGGTGCCATAAACCACAACCTGGGATGGGTTGGTGTGGATCCTTATTCATCAACTTACACTGCTTTCTTTGACAAAATAAGGCCTGAGATTGAAACCCTTGAACAAGAACAAGGTGATGATAATAATGATGATGAAGAAATTGATGATGTCACTGAGATTGAAACCCTGCCTTTGTTCCCTATGCATGGTGAAGACATCCATGACTATTGCAGCCTCAGATCCAATAATTCTTCTTCTTCTTCTTTTAACTATGATCATCATCATCATGGATTCAACAACGGTGGTTCTCGTGCTTCCTTGGAGCTTAGTCTCAATTCCTACGGTCGCAAGTCTCCAGATTATGCTTGA 960 0.4188 MEQQQQHSSSANSNNNNNGTSSHMNSGSRQSSTRWTPTTDQIRILKDLYYNNGVRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDSTTTTNVNNLPLPTMHRGSTINNNNNAPNCWNKPTEDITTTTTFHSNKYYSNNMPSSTGIASSSSSSAGMVGVGQMGNYGCGSVPMEKSFRECTISAGGGSSVGGAINHNLGWVGVDPYSSTYTAFFDKIRPEIETLEQEQGDDNNDDEEIDDVTEIETLPLFPMHGEDIHDYCSLRSNNSSSSSFNYDHHHHGFNNGGSRASLELSLNSYGRKSPDYA 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01138 319 MobiDBLite consensus disorder prediction 1 37 - -
Arst5g01138 319 Gene3D - 24 93 - -
Arst5g01138 319 Pfam Homeodomain 32 93 IPR001356 GO:0003677
Arst5g01138 319 ProSiteProfiles 'Homeobox' domain profile. 28 94 IPR001356 GO:0003677
Arst5g01138 319 MobiDBLite consensus disorder prediction 93 134 - -
Arst5g01138 319 SMART HOX_1 30 98 IPR001356 GO:0003677
Arst5g01138 319 MobiDBLite consensus disorder prediction 99 134 - -
Arst5g01138 319 CDD homeodomain 33 95 IPR001356 GO:0003677
Arst5g01138 319 SUPERFAMILY Homeodomain-like 11 95 IPR009057 -
Arst5g01138 319 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 13 293 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01138 Arst-Chr5 11669687 11671284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01138 29 309 Wox Gene Family AT2G17950 40.614 2.08e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Arst5g01138 Homeodomain 1.4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01138 - - adu:107488063 549.666