Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01133 ATGAAGCGGGCAAGGAAATCGAAATCGAACAGGGTTTCGTGGGCTCCTGCGTCTAATTTGTGTCAGATCAAATTGTTTCTGTCTGACGACTGTCCTTCAAAAGTTGGACTGAAATCTCAAGATCATCTTCAAGCAAAGACATCTTCAATGTTGCCTTCAAGTACTAATGAACATATGGACTTACCTCCTGGATTTGAAGACAATCACTTCTTAAACCAGCCAAAGGTTGAACTCTCTCGCATCTCTCCGATTAAATGGGAGCGCCCTCCTCTGTTTGCTTTCAGACATGATTGGCGTGTTGCTGCTGGTGAAGAAAGTAAGGAGAAAATGGATCAAAAGCTAAGAGAAATGAAAGTGCTTGAAGCAGTTTATCCTCGCATTTCTGCCATACCTCCCAGCCCTTCTGTTTCTCATGATGTAGACAAGGAAGGTTATGATGATAACCACACTCCTCTCATCCCTATCATTCCCATTGAGGAGGAGGATTCGATGGATATTAATCCTGAAGTGTCAGACGCAAAACTCGCAGATACCCCCACTAAGTTGCTGTCACAAAACTTGCAGCAATATATAGCAGCTGCAACACCTATTAATTCACAATGCAACACCTCTGCTGCTGTTCCCTTATCTGCAGGTGGAAACTCCATGCTGGCAATTTCTCCTGGTTCGGAACCAGATTTAGCTGCAGCCTCAGCTCTGGTAGCAGCAGCCATTTTGAAGAGTAATGAGCAAGGAAACCCAATTGATATGGATCTACTTGTTAAAATATTTAATGACCCAATAATGATAGAGAAATTGGTTAACCAACGGGGAACTGCAACCGCCACCATAACTACCTCTTCAACTACTGGGTTGAAATCTGCTGCTTCTGGGACTACACCCACAAGCACAGTTGGTTTAGTTCCTTCTTCTGCTCCAAAGCAAGCAACTTCCTTAGCCTCCATGTTGATACCTACACTTAATAAGCCAGCAATTCCCCCAGTTCCATTATCTAGTCCTTCCTCTGGTAATTTAGCAACTAGCTCAATTACCCTGCCTCCACAACCAACTACACAATCACCTTCACCTCCACCTCCATCCACTTCTACATTTAATAAGCACAGGTCTGTCAACAATAATGTTCACCATGTAACGAATGGAGCACTTCCCTCTTTAGAACCCCAGCCTCCTCCTCAAGATACAACTCTGTTATCTGGTGCAAACCAGGTGCGATCAACGGCTGCCACAGTGGCTTATCAAACAAGTAGCACCGGTTCTTCTTTTGCAGTGAAGGATGCCAACTATTATAAGAACCTTATTAGGCAACATGGTGCAGATAAGCAAGATGGTCAAGAATCACTAATAGGTATCCGTCATAATAATTTCCAAGACTTTAAAATGGTACATAACCTTAAACAAAGGGAAGTGATATTCAAAAACCAGAAACCTTGCATATACTTTAACAGCTCAAGGGGTTGCCGAAATGGTGCAAATTGCCCCTATCAGCATGATATCTCAGCTCAGTGGGGAGCTGGTAATGACCTAGTGGCACAAAATGCAAAAAGAATGAAACTAGGTACAGAAGTTAATGGGAGGATATAA 1581 0.4307 MKRARKSKSNRVSWAPASNLCQIKLFLSDDCPSKVGLKSQDHLQAKTSSMLPSSTNEHMDLPPGFEDNHFLNQPKVELSRISPIKWERPPLFAFRHDWRVAAGEESKEKMDQKLREMKVLEAVYPRISAIPPSPSVSHDVDKEGYDDNHTPLIPIIPIEEEDSMDINPEVSDAKLADTPTKLLSQNLQQYIAAATPINSQCNTSAAVPLSAGGNSMLAISPGSEPDLAAASALVAAAILKSNEQGNPIDMDLLVKIFNDPIMIEKLVNQRGTATATITTSSTTGLKSAASGTTPTSTVGLVPSSAPKQATSLASMLIPTLNKPAIPPVPLSSPSSGNLATSSITLPPQPTTQSPSPPPPSTSTFNKHRSVNNNVHHVTNGALPSLEPQPPPQDTTLLSGANQVRSTAATVAYQTSSTGSSFAVKDANYYKNLIRQHGADKQDGQESLIGIRHNNFQDFKMVHNLKQREVIFKNQKPCIYFNSSRGCRNGANCPYQHDISAQWGAGNDLVAQNAKRMKLGTEVNGRI 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01133 526 MobiDBLite consensus disorder prediction 362 379 - -
Arst5g01133 526 MobiDBLite consensus disorder prediction 327 397 - -
Arst5g01133 526 MobiDBLite consensus disorder prediction 331 348 - -
Arst5g01133 526 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 3 519 - -
Arst5g01133 526 ProSiteProfiles Zinc finger C3H1-type profile. 471 499 IPR000571 GO:0046872
Arst5g01133 526 MobiDBLite consensus disorder prediction 281 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01133 Arst-Chr5 11563928 11569348 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Arst5g01133 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01133 - - adu:107488052 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01133 5 11563928 11569348 Arst5g01133 5 11563928 11569348 ECH