Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01132 ATGAAGCGGGCAAGGAAATCGAAATCGAACAGGGTTTCGTGGGCTCCTGCGTCTAATTTGTGTCAGATCAAATTGTTTCTGTCTGACGACTGTCCTTCAAAAGTTGGACTGAAATCTCAAGATCATCTTCAAGCAAAGACATCTTCAATGTTGCCTTCAAGTACTAATGAACATATGGACTTACCTCCTGGATTTGAAGACAATCACTTCTTAAACCAGCCAAAGGTTGAACTCTCTCGCATCTCTCCGATTAAATGGGAGCGCCCTCCTCTGTTTGCTTTCAGACATGATTGGCGTGTTGCTGCTGGTGAAGAAAGTAAGGAGAAAATGGATCAAAAGCTAAGAGAAATGAAAGTGCTTGAAGCAGTTTATCCTCGCATTTCTGCCATACCTCCCAGCCCTTCTGTTTCTCATGATGTAGACAAGGAAGGTTATGATGATAACCACACTCCTCTCATCCCTATCATTCCCATTGAGGAGGAGGATTCGATGGATATTAATCCTGAAGTGTCAGACGCAAAACTCGCAGATACCCCCACTAAGTTGCTGTCACAAAACTTGCAGCAATATATAGCAGCTGCAACACCTATTAATTCACAATGCAACACCTCTGCTGCTGTTCCCTTATCTGCAGGTGGAAACTCCATGCTGGCAATTTCTCCTGGTTCGGAACCAGATTTAGCTGCAGCCTCAGCTCTGGTAGCAGCAGCCATTTTGAAGAGTAATGAGCAAGGAAACCCAATTGATATGGATCTACTTGTTAAAATATTTAATGACCCAATAATGATAGAGAAATTGGTTAACCAACGGGGAACTGCAACCGCCACCATAACTACCTCTTCAACTACTGGGTTGAAATCTGCTGCTTCTGGGACTACACCCACAAGCACAGTTGGTTTAGTTCCTTCTTCTGCTCCAAAGCAAGCAACTTCCTTAGCCTCCATGTTGATACCTACACTTAATAAGCCAGCAATTCCCCCAGTTCCATTATCTAGTCCTTCCTCTGGTAATTTAGCAACTAGCTCAATTACCCTGCCTCCACAACCAACTACACAATCACCTTCACCTCCACCTCCATCCACTTCTACATTTAATAAGCACAGGTCTGTCAACAATAATGTTCACCATGTAACGAATGGAGCACTTCCCTCTTTAGAACCCCAGCCTCCTCCTCAAGATACAACTCTGTTATCTGGTATAAAGCGCACGTCATCATTACCTTGTGTGAATTCATCCAGTGAATTGAGCACAGTGTCTTTGAATTCAACTGCTGTGAATTTGCATGCAGGTGCAAACCAGGTGCGATCAACGGCTGCCACAGTGGCTTATCAAACAAGTAGCACCGGTTCTTCTTTTGCAGTGAAGGATGCCAACTATTATAAGAACCTTATTAGGCAACATGGTGCAGATAAGCAAGATGGTCAAGAATCACTAATAGGTATCCGTCATAATAATTTCCAAGACTTTAAAATGGTACATAACCTTAAACAAAGGGAAGTGATATTCAAAAACCAGAAACCTTGCATATACTTTAACAGCTCAAGGGGTTGCCGAAATGGTGCAAATTGCCCCTATCAGCATGATATCTCAGCTCAGTGGGGAGCTGGTAATGACCTAGTGGCACAAAATGCAAAAAGAATGAAACTAGGTACAGAAGTTAATGGGAGGATATAA 1674 0.4295 MKRARKSKSNRVSWAPASNLCQIKLFLSDDCPSKVGLKSQDHLQAKTSSMLPSSTNEHMDLPPGFEDNHFLNQPKVELSRISPIKWERPPLFAFRHDWRVAAGEESKEKMDQKLREMKVLEAVYPRISAIPPSPSVSHDVDKEGYDDNHTPLIPIIPIEEEDSMDINPEVSDAKLADTPTKLLSQNLQQYIAAATPINSQCNTSAAVPLSAGGNSMLAISPGSEPDLAAASALVAAAILKSNEQGNPIDMDLLVKIFNDPIMIEKLVNQRGTATATITTSSTTGLKSAASGTTPTSTVGLVPSSAPKQATSLASMLIPTLNKPAIPPVPLSSPSSGNLATSSITLPPQPTTQSPSPPPPSTSTFNKHRSVNNNVHHVTNGALPSLEPQPPPQDTTLLSGIKRTSSLPCVNSSSELSTVSLNSTAVNLHAGANQVRSTAATVAYQTSSTGSSFAVKDANYYKNLIRQHGADKQDGQESLIGIRHNNFQDFKMVHNLKQREVIFKNQKPCIYFNSSRGCRNGANCPYQHDISAQWGAGNDLVAQNAKRMKLGTEVNGRI 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01132 557 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 3 550 - -
Arst5g01132 557 MobiDBLite consensus disorder prediction 362 379 - -
Arst5g01132 557 MobiDBLite consensus disorder prediction 327 397 - -
Arst5g01132 557 MobiDBLite consensus disorder prediction 331 348 - -
Arst5g01132 557 ProSiteProfiles Zinc finger C3H1-type profile. 502 530 IPR000571 GO:0046872
Arst5g01132 557 MobiDBLite consensus disorder prediction 281 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01132 Arst-Chr5 11563927 11569350 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Arst5g01132 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01132 - - adu:107488052 1045.8