Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01124 ATGGAATCATCGTGTGTCCCACCTGGGTTTCGCTTCCACCCAACGGATGAAGAGCTTGTTGGTTATTATCTGAGGAAGAAAGTGGCATCTCAGAAGATAGACCTTGACGTTATCAGAGAGATCGATCTCTATCGTATTGAACCCTGGGATCTCCAAGAGAGATGTAGGATCGGGTATGAAGAGCAGAACGAGTGGTACTTCTTCAGCCACAAAGACAAGAAGTATCCGACGGGGACTCGAACGAACAGGGCCACCATGGCGGGGTTCTGGAAGGCCACGGGAAGAGACAAGGCGGTGTACGACAAGGCGAAGCTGATCGGGATGAGGAAGACTCTGGTCTTCTACAAAGGGAGAGCCCCTAACGGCCAGAAAACAGACTGGATCATGCACGAGTACAGACTTGAATCCGATGAAAACGGACCCCCTCAGGAGGAAGGGTGGGTTGTTTGTAGAGCATTCAAGAAAAGGACGACAAACGGGCAAACGAAGACTATGGAAGGATGGGATTCAAGCTACTTGTACGAGGAAGCAAGCGGCGGCGGTGGCGGTGGCGGCACGGTTGTTGAGTCAATTGAGCAGCTGCTCTCAAGGCAGGGTCATCATCATCATCATCATCAAAGCAGCTTCATGTGCAAGCAAGAAATAGAGAACATGCATGCAAATATAGCAGCAGAGCAATTTGTACAGCTTCCACAGCTTGAGAGCCCAAGTTTGCCGCTAGTTAAGAGGCCAACAACAACAACAAGCACAATGGCACTAGTCTCAGAAAGCAATGAAGAGCATAACATGTTATCTTGCAATAACACGAAGAAAGTAGTGACTGATTGGAGGGATCTTGATAAGTTTGTGGCATCTCAACTGAGTCATGGAGGAGACAATAGTAGGCACGAAACTGAAACCGATGATGCAGCAGTGCTCCCAAGCTTTATGGATAATAACAACCATGACAACAATGGTAGCATCTCGGACATGTCATTGCTGCAGCTTCTGCAGAGTAGTAGTAGTAGTAATAGTAGGGTCAACAATGAAGGGAACAGGTTGATGATGAGCATGAGCCCCTTTCTAAACACAAGCTCTGACTGTGATATTGGGATATGCGTCTTCGAAAATTAA 1113 0.4762 MESSCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKAKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENGPPQEEGWVVCRAFKKRTTNGQTKTMEGWDSSYLYEEASGGGGGGGTVVESIEQLLSRQGHHHHHHQSSFMCKQEIENMHANIAAEQFVQLPQLESPSLPLVKRPTTTTSTMALVSESNEEHNMLSCNNTKKVVTDWRDLDKFVASQLSHGGDNSRHETETDDAAVLPSFMDNNNHDNNGSISDMSLLQLLQSSSSSNSRVNNEGNRLMMSMSPFLNTSSDCDIGICVFEN 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01124 370 ProSiteProfiles NAC domain profile. 6 155 IPR003441 GO:0003677|GO:0006355
Arst5g01124 370 FunFam NAC domain-containing protein 15 159 - -
Arst5g01124 370 Pfam No apical meristem (NAM) protein 7 134 IPR003441 GO:0003677|GO:0006355
Arst5g01124 370 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 263 - -
Arst5g01124 370 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Arst5g01124 370 SUPERFAMILY NAC domain 3 155 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01124 Arst-Chr5 11448857 11452353 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01124 1 370 NAC Transcription Factor Family AT2G18060 58.718 4.49e-151 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst5g01124 NAM 3.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01124 - - aprc:113869508 481.485