Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01122 ATGCGAGCTCTTCTACTATTTCTAGTGCTGTGCGCACCTTTCTTATCTTGCGCCGATCGCAGCGCCGCAACCGTTGCTGAGATCCAAGCCTTGACGTCCTTCAAGCTCAACCTTCACGATCCTCTAGGAGCTCTCAACAGCTGGGATCCCTCCTCGCCGGCGGCCCCGTGCGACTGGCGCGGCGTTGCCTGCACCAGCGGCCGTGTCACTGAGTTGCGCGTACCTCGCCTTCAACTCGGTGGCAGACTCACTGAACGAATCTCCGAGTTGCGCATGCTGCGCAAGTTAAGCCTCCGTTCGAACTCCTTTAACGGAACCATTCCTTCGTCTCTCTCCAAATGCACACTCCTGCACTCTGTCTTCTTGCAGGACAACTCTTTTTCCGGCGTCATTCCGCCGGAGATCGGGAACCTCACCGGTCTTCAGATTTTCAACGTGGCGCAGAACCACCTCTCCGGAGAAGTCTCCGGCGAGCTCCCTCTTGGCCTCAAGTACTTCGACCTCTCATCCAACGCCTTCTCCGGCGAGATTCCAACTGCCATTGCCAACCTCTCTCAGCTCCAGCTGATCAACCTATCGTACAACCAGTTCTCCGGCGAGCTTCCGGCGAGCTTCGGGCAGCTTCAGCAGCTGCAGTACCTCTGGCTCGATCACAACCTCCTCAGGGGAACTCTACCTTCGGCGCTCGCGAACTGCTCTTCTCTCGTGCACCTCAGCGTTGAAGGAAACGCTCTCAGCGGCGTGATTCCGTCGGCGATTTCTGCCCTGCCGAATCTTCAGGTGATGTCTCTATCACAGAACAATCTCACTGGTTCCATTCCAGCCTCCTTTTTCTGCAACGTTTCGGTCCACTCGCCTTCGCTTCGGATAGTTCAACTTGGATTCAACGGTTTCACGGATTTCGTGGGGCCTGAGACGAAGAGCACGTGTTTCACTGTTCTTCAGGTTTTGGATGTTCAGAACAATCACATACGAGGCAAATTTCCCTTGTGGTTAACCAATGTCACTACGCTAACGGTTCTTGATGTTTCCAGCAATGCACTTTCCGGCGAGGTTCCGCCGGAGATAGGGAGCCTCACCAAACTGGTGCAGTTAAAGATGGCCAACAATTCGTTTTCCGACGCCATTCCTGTGGAAATCAAGAAATGCTGGTCGCTGAGTGTGGTTGACTTTGAAGGTAACGAGCTTTCCGGCGAAGTTCCTTCGTTTTTCGGTGACATGACAGAATTGAAGGTGCTGTCCCTTGGGGGGAACCACTTCCATGGCTCAGTTCCGGTGAGTTTTGGTAACCTTTCCTCTCTTGAAACGTTGAGTCTGAGAGGTAATAGTTTGAATGGAACCTTGCCTGATACGATAATGGCGTTGATCAATTTGACCGTGCTTGACCTCAGTGGAAACAAGTTTAGCGGTGAAGTGTCTCCTACTATTGGAAATCTGAATAGATTGATTGTTCTCAATATCAGTGGCAATGACTTGTCTGGAAAAATTCCTGCTAGTGTGGGGAATCTTTTCAGGCTCACTACACTTGACTTGAGCAAACAGAATCTTTCAGGTGAGTTGCCGTTTGAGCTCTCAGGTCTGCCAAATCTGCAAGTCATTGCTCTGCAGGAGAACAAGTTATCTGGTGATGTACCTGAAGGTTTTAGCAGTTTGATGAGTTTGCAGTATTTGAATCTCAGCTCTAATGAATTTTCTGGCCATATACCTGAAAACTATGGCTTTCTTCGTTCGTTGACCGTGCTTTCATTGGCTCATAATCACATTTCGGGGGTGATTCCTCCGGAAATTGGAAACTGTTCTGATGTTGAAGTTCTTTTATCTGGAGATGTGCCTGGGGATATTTCCAAATGCTCCTCGTTGAATTCTTTGTTAGTGGATCACAACCATCTTTCAGGGAACATACCAGAGGCATTGACAGATCTGTCAAACCTAACAATGCTGGATCTCTCTGCTAATAACTTCAGTGGGGAAATTCCTAGTAATCTTTCTATGATCCCTGGCTTGGTCTACTTCAACGTTTCTGGGAACAACCTTGACGGTGAGATACCTCCAGCATTGGGCTCTAGATTCAACAATGCCTCTTCATTTGCAGGTAATGAGAAATTATGTGGGAAGCCGTTGGATAGAAAGTGCGAGGAGATGACCAAAAAGGATAAAAAGAGGTTGATTGTCTTGATTATCATCATTGCATCTGGAGCTTTATTACTTGCATTGTGTTGCTGCTTTTACATTTTCAGCCTACTTCGATGGCGAAGGAGGCTCAAAGAAGGGGTTTCAGGGGAGAAGAAAAAGAGCCCGGCAAGGGCCAGTTCTGGGGCAAGTGGAGGCCGAGGCAGCACGGATAACGGTGGACCAAAGCTGGTTATGTTCAACACCAAAATCACCCTGGCCGAAACAATAGAGGCGACGAGACAATTCGACGAGGAGAATGTGCTGAGCAGAACAAGGTTTGGACTAGTATTCAAGGCATGCTACAACGATGGCATGGTCCTATCGGTCCGCAGGCTCCCAGATGGGGCATTGGACGAGAACATGTTCAGAAAAGAAGCTGAATCATTAGGCAAAGTCAGGCACCGAAACCTAACAGTTCTAAGAGGCTACTACGCTGGTCCACCAGACATGAGACTCTTAGTCTACGACTACATGCCGAATGGAAACCTCGCAACACTCCTCCAAGAAGCTTCACATCAAGATGGCCATGTTCTGAATTGGCCAATGCGACACCTCATTGCACTGGGAATTGCTCGGGGCTTAGCGTTCCTGCACCAGTCCTCAATGGTCCATGCGGACGTGAAACCACAGAATGTCCTGTTCGATGCAGATTTCGAAGCCCATTTATCTGATTTTGGGTTAGAGAGGCTAACAATAGCAACCCCAAGCGAAGCCTCAACTTCAGGCTCAGTTGGCACTTTGGGTTATGTATCTCCAGAAGCAATCTTAACTGGGGAAGCCACCAAGGAGTCTGATGTATACAGCTTTGGCATCGTGTTGCTGGAGCTTCTAACAGGAAAGCGCCCCGTGATGTTCACCCAAGACGAAGACATAGTCAAGTGGGTGAAGAAGCAACTACAGAGGGGTCAAATTACTGAGCTACTAGAGCCAGGGTTGCTTGAATTGGACCCAGAATCATCAGAGTGGGAAGAGTTCTTGTTGGGTGTCAAAGTAGGCTTGCTTTGCACGGCACCTGATCCGCTTGACCGACCAACCATGTCCGACATCGTTTTCATGCTCGAAGGCTGCCGTGTCGGCCCTGATATCCCCTCCTCCGCCGATCCCACCTCTCAAACTTCTCCAGCATAA 3300 0.4964 MRALLLFLVLCAPFLSCADRSAATVAEIQALTSFKLNLHDPLGALNSWDPSSPAAPCDWRGVACTSGRVTELRVPRLQLGGRLTERISELRMLRKLSLRSNSFNGTIPSSLSKCTLLHSVFLQDNSFSGVIPPEIGNLTGLQIFNVAQNHLSGEVSGELPLGLKYFDLSSNAFSGEIPTAIANLSQLQLINLSYNQFSGELPASFGQLQQLQYLWLDHNLLRGTLPSALANCSSLVHLSVEGNALSGVIPSAISALPNLQVMSLSQNNLTGSIPASFFCNVSVHSPSLRIVQLGFNGFTDFVGPETKSTCFTVLQVLDVQNNHIRGKFPLWLTNVTTLTVLDVSSNALSGEVPPEIGSLTKLVQLKMANNSFSDAIPVEIKKCWSLSVVDFEGNELSGEVPSFFGDMTELKVLSLGGNHFHGSVPVSFGNLSSLETLSLRGNSLNGTLPDTIMALINLTVLDLSGNKFSGEVSPTIGNLNRLIVLNISGNDLSGKIPASVGNLFRLTTLDLSKQNLSGELPFELSGLPNLQVIALQENKLSGDVPEGFSSLMSLQYLNLSSNEFSGHIPENYGFLRSLTVLSLAHNHISGVIPPEIGNCSDVEVLLSGDVPGDISKCSSLNSLLVDHNHLSGNIPEALTDLSNLTMLDLSANNFSGEIPSNLSMIPGLVYFNVSGNNLDGEIPPALGSRFNNASSFAGNEKLCGKPLDRKCEEMTKKDKKRLIVLIIIIASGALLLALCCCFYIFSLLRWRRRLKEGVSGEKKKSPARASSGASGGRGSTDNGGPKLVMFNTKITLAETIEATRQFDEENVLSRTRFGLVFKACYNDGMVLSVRRLPDGALDENMFRKEAESLGKVRHRNLTVLRGYYAGPPDMRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHQSSMVHADVKPQNVLFDADFEAHLSDFGLERLTIATPSEASTSGSVGTLGYVSPEAILTGEATKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMSDIVFMLEGCRVGPDIPSSADPTSQTSPA 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01122 1099 Pfam Protein kinase domain 816 1073 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g01122 1099 Gene3D Ribonuclease Inhibitor 159 300 IPR032675 -
Arst5g01122 1099 SUPERFAMILY L domain-like 285 604 - -
Arst5g01122 1099 ProSiteProfiles Protein kinase domain profile. 806 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g01122 1099 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 605 682 - -
Arst5g01122 1099 Gene3D Ribonuclease Inhibitor 25 158 IPR032675 -
Arst5g01122 1099 Gene3D Phosphorylase Kinase; domain 1 782 881 - -
Arst5g01122 1099 Gene3D Ribonuclease Inhibitor 432 720 IPR032675 -
Arst5g01122 1099 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 882 1085 - -
Arst5g01122 1099 ProSitePatterns Serine/Threonine protein kinases active-site signature. 926 938 IPR008271 GO:0004672|GO:0006468
Arst5g01122 1099 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 457 604 - -
Arst5g01122 1099 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Arst5g01122 1099 FunFam Piriformospora indica-insensitive protein 2 352 448 - -
Arst5g01122 1099 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 332 1077 - -
Arst5g01122 1099 SUPERFAMILY L domain-like 569 707 - -
Arst5g01122 1099 SUPERFAMILY Protein kinase-like (PK-like) 786 1086 IPR011009 -
Arst5g01122 1099 SUPERFAMILY RNI-like 71 399 - -
Arst5g01122 1099 Gene3D Transferase(Phosphotransferase) domain 1 882 1085 - -
Arst5g01122 1099 Gene3D Ribonuclease Inhibitor 304 427 IPR032675 -
Arst5g01122 1099 SMART LRR_typ_2 407 430 IPR003591 -
Arst5g01122 1099 SMART LRR_typ_2 90 114 IPR003591 -
Arst5g01122 1099 SMART LRR_typ_2 431 454 IPR003591 -
Arst5g01122 1099 SMART LRR_typ_2 208 231 IPR003591 -
Arst5g01122 1099 SMART LRR_typ_2 527 550 IPR003591 -
Arst5g01122 1099 SMART LRR_typ_2 335 359 IPR003591 -
Arst5g01122 1099 SMART LRR_typ_2 184 207 IPR003591 -
Arst5g01122 1099 SMART LRR_typ_2 575 599 IPR003591 -
Arst5g01122 1099 SMART LRR_typ_2 256 280 IPR003591 -
Arst5g01122 1099 SMART LRR_typ_2 455 479 IPR003591 -
Arst5g01122 1099 SMART LRR_typ_2 641 665 IPR003591 -
Arst5g01122 1099 FunFam Putative LRR receptor-like serine/threonine-protein kinase 769 881 - -
Arst5g01122 1099 FunFam Nuclear pore complex protein NUP107 24 160 - -
Arst5g01122 1099 FunFam Inactive leucine-rich repeat receptor-like protein kinase 161 251 - -
Arst5g01122 1099 Pfam Leucine Rich Repeat 481 503 IPR001611 GO:0005515
Arst5g01122 1099 MobiDBLite consensus disorder prediction 759 785 - -
Arst5g01122 1099 Pfam Leucine rich repeat 505 563 IPR001611 GO:0005515
Arst5g01122 1099 Pfam Leucine rich repeat 409 468 IPR001611 GO:0005515
Arst5g01122 1099 Pfam Leucine rich repeat 234 282 IPR001611 GO:0005515
Arst5g01122 1099 SMART serkin_6 806 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g01122 1099 FunFam Probable LRR receptor-like serine/threonine-protein kinase At4g36180 252 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01122 Arst-Chr5 11382390 11386874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01122 4 1099 Receptor kinase-like Gene Family AT4G36180 67.810 0.0 1481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Arst5g01122 Pkinase 5.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01122 - - gmx:100795838 1710.27