Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01070 ATGAGTTCATACATGGCGTCTTTGTCTTCTTCCTTCACAAACTTTCGATCCGCTTCCTCATGGTTCGAGGTCTACGCCGCCTTCTCCACTCTCATGATCATTCTGAGAACAGCTGTCAACGACATCGTGCCGGAGAAGCTCCGCTCCTCCATTGCCAGAAAGCTCGAGTCATTCTTCTTCCCCACGCACAAACCAAACAACCTCGTATCCATCAGAATCAACCAAAGATGGGATGGCCAACACGGCGAACACAACGAACTCTACAACGCTGCTTCCAAGTACCTCCCAACCAGAATATCCGAAACCTACAAGGCCCTCAGATTAGCCAAATTGAACTCTCACAAGGGCCTCATGCTCGCAATCGACGCCAACCAAGAAGTAATCGACGAATTCGAAGGGATCCGGTATACTTGGACTCTCGATTTAGGCTCCGACCAAAATGCCGACTCCTCGAAATCCGATAAGGATCCTGCGTTTGTTCTAAACTTCAACGAGAAGCACAGAGACACCGTGATGAAGAGGTACATTCCGCACTTGCTTGCAACCTGCGAGGCCATGGATGCAGCGGACATGAGCATTAAGATATTTTCAATGGCGCACGGGTATTGGAACGAGAGTGAGTTGTGTCACCCTGCCACGCTGGACACGCTCGCTTTGGATCCTGAATTGAAGCGAACCATTGTGGATGATCTGGACCGGTTCTTGAAGAGGAAGGAGTTCTACAAGAAAGTGGGTAAGCCTTGGAAACGTGGCTACTTGTTGTACGGTCCTCCTGGAACGGGGAAATCTAGCCTCATTGCTGCCATTGCGAATTACTTGAAGTTCAATGTGTATGATTTGGAGCTGGACTCCATTACCTCCAACGAGAGCCTGATGCTACTGATGAGGAGTACAACCAGTCGTTCCATCATCGTCATTGAAGACATTGACTGCAACAAGGAGGTCCATGTTCGTCGCAGACAACAAGAAGACTTCGGGGACACTGATATAGAGTCAGTCCAGCATGACGATGCTGCCCCTGAAATTATAAAGGTTGACAAGTTTACCCTCTCGGCTTTGCTCAACTACATGGATGGCTTGTGGTCAGGCTACGGAGAGGAAAGGATTATAATATTCACCACGAACCACAAAGACAAGATTGACCCGGCATTGTTGAGGCCAGGCAGGATGGACATGCACATTCACTTGTCCTTCCTCAGAGCCAAGGCGTTTAGAATATTGGCCTCTAATTATTTGGACATTCCGGGGGACCAGCCTCATCCCCTGTTTCAGGAAATTGAGGACTTGTTGGACACAACAGATGTCACTCCAGCGGTGGTGGCAGAGCAGTTGATCAGAAGCGAAGATCCTGATGTTGCTTTGGATGGACTCTTTAAGTTCCTTCAAGAGATACACAATTCAGGCAAAAGTAGAGATTCCGCTGAGACTTTAGAGATTTGA 1440 0.4847 MSSYMASLSSSFTNFRSASSWFEVYAAFSTLMIILRTAVNDIVPEKLRSSIARKLESFFFPTHKPNNLVSIRINQRWDGQHGEHNELYNAASKYLPTRISETYKALRLAKLNSHKGLMLAIDANQEVIDEFEGIRYTWTLDLGSDQNADSSKSDKDPAFVLNFNEKHRDTVMKRYIPHLLATCEAMDAADMSIKIFSMAHGYWNESELCHPATLDTLALDPELKRTIVDDLDRFLKRKEFYKKVGKPWKRGYLLYGPPGTGKSSLIAAIANYLKFNVYDLELDSITSNESLMLLMRSTTSRSIIVIEDIDCNKEVHVRRRQQEDFGDTDIESVQHDDAAPEIIKVDKFTLSALLNYMDGLWSGYGEERIIIFTTNHKDKIDPALLRPGRMDMHIHLSFLRAKAFRILASNYLDIPGDQPHPLFQEIEDLLDTTDVTPAVVAEQLIRSEDPDVALDGLFKFLQEIHNSGKSRDSAETLEI 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01070 479 SMART AAA_5 248 400 IPR003593 GO:0016887
Arst5g01070 479 Gene3D - 205 394 IPR027417 -
Arst5g01070 479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 449 IPR027417 -
Arst5g01070 479 Pfam Domain associated at C-terminal with AAA 43 140 IPR025753 -
Arst5g01070 479 CDD RecA-like_BCS1 227 396 - -
Arst5g01070 479 Gene3D - 395 465 - -
Arst5g01070 479 Pfam ATPase family associated with various cellular activities (AAA) 253 396 IPR003959 GO:0005524|GO:0016887
Arst5g01070 479 PANTHER BCS1 AAA-TYPE ATPASE 27 466 - -
Arst5g01070 479 ProSitePatterns AAA-protein family signature. 368 386 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01070 Arst-Chr5 10518899 10520743 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01070 222 396 Calmodulin-binding Proteins AT3G56690 29.348 4.85e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01070 - K08900 gmx:100789094 562.762