Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01000 ATGTCTGACTCACATCTAACTTTCTTTTCTCTTTCTTCTTCCATTCTTGCTCTTCTTCTCATCTTCATTTTCATCTTCAAGAGGAAGCAAACCAAACCCAAGCTCAACCTTCCACCCGGTAAAATGGGCTGGCCCTTTCTTGGTGAAACCATTGGTTACTTGAAGCCTTATTCTGCTACCACCATAGGAGAATTCATGGACCAACACATAGCAAGGTATGGTAAAATTTACAAGTCGAAATTGTTTGGTGAGCCAGCAATAGTGTCAGCAGATGCAGGGTTGAATAGGTTCATATTGCAAAACGAAGGGAAATTGTTTGAGTGCAGTTACCCGAGAAGCATTGGTGGAATACTTGGGAAATGGTCGATGTTGGTTTTGGTTGGTGACATGCATAGGGACATGAGGGCCATTTCACTAAACTTCCTCAGCCATGGCAGGCTCAGAACACATCTCTTGAAGGAGGTTGAGAACCACACCCTTCTTGTTCTTAACTCCTGGAAACACAATTCCACCTTCTCTGCTCAAGATGAAGCCAAAAGGTTCACCTTCAATTTGATGGCCAAACACATCATGAGCTTGGATCCTGGGAATGTTGAGACAGAAAAACTAAAAGAGGAGTATGTCACTTTCATGAAGGGTGTTGTTTCTGCGCCATTGAATTTACCCGGAACTGCATATAGAAGAGCATTAAAGTCGAGGTCCACCATACTCAAGTTCATAGAAGCGAAAATGACCGAAAGAGTGAGAAAGATGGAAGAAGGAAATGAGAGCTTGGAGGAAGATGATCTTCTAGGATGGGTTTTGAAGCATTCAAATCTCTCAACAGAGCAGATTCTGGACTTGGTTCTGAGTTTGCTCTTTGCTGGCCATGAAACTTCGTCAGTAGCTATAGCACTTGCCATTTATTTCTTACCCGGTTGTCCTCAAGCCATGGAACAGTTAAGGGAAGAACACAGCGAAATCGCCAGAGCTAAGAAACAAGCAGGGGAGGTTGAACTCACTTGGGATGACTACAAAAGAATGGAATTTACCCACTGTGTTGTGAACGAGACACTTCGGTTGGGAAATGTTGTGAGGTACCTTCACAGGAAGGCGCTTAAAGACGTTCGGTACAAAGGTTATGACATTCCATGTGGGTGGAAAGTCCTTCCGGTGATTGCAGCTGTGCATCTGGATCCTTCACTTTTTGACCAACCTCAACAATTCAATCCATGGAGATGGCAGATCAATGGTCGTCGTGGAAGTTGCTCATCATCAAACGGGAGTAGCAGTAATATCAACGCCAATAACAATAACACCACCACCACCACCAACAATTTGTTCTTGCCGTTCGGGGGAGGACCACGACTATGCGCTGGATCAGAGTTAGCAAAGCTTGAAATGGCTGTTTTCATCCACCATCTCGTCCTCAACTACCAATGGGAGTTAGCTGATTCCGATCAACCTTATGTATACCCTTTTGTTGACTTCCCCAAAGGCCTACCCATCACGGTCCAAAACCACTCATATCTCTCTTAG 1518 0.444 MSDSHLTFFSLSSSILALLLIFIFIFKRKQTKPKLNLPPGKMGWPFLGETIGYLKPYSATTIGEFMDQHIARYGKIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRAISLNFLSHGRLRTHLLKEVENHTLLVLNSWKHNSTFSAQDEAKRFTFNLMAKHIMSLDPGNVETEKLKEEYVTFMKGVVSAPLNLPGTAYRRALKSRSTILKFIEAKMTERVRKMEEGNESLEEDDLLGWVLKHSNLSTEQILDLVLSLLFAGHETSSVAIALAIYFLPGCPQAMEQLREEHSEIARAKKQAGEVELTWDDYKRMEFTHCVVNETLRLGNVVRYLHRKALKDVRYKGYDIPCGWKVLPVIAAVHLDPSLFDQPQQFNPWRWQINGRRGSCSSSNGSSSNINANNNNTTTTTNNLFLPFGGGPRLCAGSELAKLEMAVFIHHLVLNYQWELADSDQPYVYPFVDFPKGLPITVQNHSYLS 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01000 505 CDD CYP90-like 69 498 - -
Arst5g01000 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Arst5g01000 505 PANTHER CYTOCHROME P450 26 33 479 - -
Arst5g01000 505 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst5g01000 505 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst5g01000 505 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst5g01000 505 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst5g01000 505 PRINTS E-class P450 group IV signature 451 469 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst5g01000 505 PRINTS E-class P450 group IV signature 64 87 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst5g01000 505 PRINTS E-class P450 group IV signature 435 451 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst5g01000 505 PRINTS E-class P450 group IV signature 390 408 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst5g01000 505 PRINTS E-class P450 group IV signature 341 357 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst5g01000 505 PRINTS E-class P450 group IV signature 279 305 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst5g01000 505 Pfam Cytochrome P450 38 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst5g01000 505 SUPERFAMILY Cytochrome P450 34 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst5g01000 505 FunFam Cytochrome P450 90B1 27 500 - -
Arst5g01000 505 Gene3D Cytochrome P450 26 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst5g01000 505 Coils Coil 241 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01000 Arst-Chr5 9706991 9710850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01000 27 408 Cytochrome P450 AT3G50660 75.931 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01000 K09587 - gmx:100802498 836.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01000 5 9706991 9710850 Arst5g01000 5 9706991 9710850 ECH