Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00993 ATGTCTTCCTCCAATTCTTCAACACTCTCACCACCCTCTGACGATGATACTCCCTCTTCTGATCAGAGCCCACCATCACCCTCATCGTCATCACCCTCGCCACCATCCTCGTCCACCCAAGATGATTCTGATGATTCTTCATCATCATCACCACCACCATCACCGCCATCACCGCCGCCACCCTCCCAAGATTCCTCCTCCCCGTCATCATCATCACCTCCAGCGCCGTTACCACCCACGCCAGCCTCACAAGATTCCTCTCCTCCTGCTACCCGACCTCCAGGATCATCCTCCGGCGAGGCATTAGTACCGTCTCCTCCAGGAACCTCACCATCAGGGTCTAAGGGTCTTGGCAATCTCTTCAGTGATGATTTGGGACACATTGTAGCATACGTTTCAATAGGAGTTTTTTTTCTTATCCTTCTCATTATTGCCATTGTTTGCATAAGAAGAAGGTCCAAAAAGAAGAAGCAGCAACAACAACAGAAGTTGTACTACTATGGTGGAGATGCACCTGATCAACAAAAAACTAACTACTACTACAACAACAACAATGGTGGGAAGAATCAAAATTACTACGGAGGAGGTGGTGGTCCAGCAAATCAAGAACATGTAGTGAGGATGCCAAATGGAATGATAGGGATGGGAATGGTTCCGGGTCCTAACGCCGGTGTTGGTGCTGCTTGGGGTGCACAGCAACCTCCTCAGATGATTATGTCAAACGGCTCAGACTTGAGCTCGAATTTCTCGATGGGGCCTCCGCCTCTGCCTCCTCCGTCACCGGGTATTACATTAGGCCTCAAGGCTGGCACCTTCACCTACGAAGAACTCGCAGCAGCAACAGGAAACTTTGCAGATGCAAACATGATAGGGCAAGGTGGATTCGGTTACGTCTACAAGGGAGTGTTCCCTAACGGAAAGGAGGTGGCCGTTAAGACTCTCAAGGCCGGTAGCGGTCAAGGTGAGCGCGAGTTCCAGGCTGAGATTGAGATCATCAGCCGTGTTCATCATCGCCACCTTGTTTCTCTTGTTGGTTACTGCATTGCCGGTGGCCAGAGAATGTTGGTCTATGAATTCATCCCTAATAACACCTTGGAATATCACCTTCATGGTAAGGATCTTCCTACCATGGATTGGCCTACCAGAATGCGCATTGCCATTGGAGCTGCTAAGGGACTTGCTTATCTTCATGAAGATTGTCATCCTCGCATCATCCATCGTGACATCAAAGCTGCCAATGTCCTTATTGATAGTAGCTTCGAAGCAAAGGTGGCTGATTTCGGATTGGCTAAGCTGACGACAGATAATAACACTCATGTTTCAACTCGTGTCATGGGAACATTCGGGTACTTAGCTCCTGAATATGCATCAAGTGGAAAATTGACAGAGAAGTCTGATGTATTCTCGTTTGGAGTGATGCTATTAGAAATCATAACCGGGAAGCGCCCTGTGGATCTCTCAGGTGCCATGGATGACAGCTTAGTTGACTGGGCACGGCCACTACTGATACGTGGGTTGGAGGAAGACGGCAACTTTGGAGAATTGGTAGATCCATGTTTGGAAGGAAACTACAACAAACAAGAAATGACAAGAATGGCAGCTTGCGCTTCTTCCAGCATCCGTCACTCTGCCAAGAAGCGTCCAAAAATGAGTCAGATTGTAAGGGCGTTGGAAGGAGATGTGTCATTGGATGACTTGAAGAATATGGGTAAGGCAGGTGCAATTGGTGGTAGCGGTGGTGGTGTCCTGAACCCTTCAGGAGGAGGGAGCAGTGACTATGACACAATGCAGTACAATGCTGATTTACAAAAGTTCAGAAAAACGGTGTTTTCAAGCCCGGAAAACACAAGCGGTAGTAGTGGTGAGAGGCCTTAA 1875 0.4848 MSSSNSSTLSPPSDDDTPSSDQSPPSPSSSSPSPPSSSTQDDSDDSSSSSPPPSPPSPPPPSQDSSSPSSSSPPAPLPPTPASQDSSPPATRPPGSSSGEALVPSPPGTSPSGSKGLGNLFSDDLGHIVAYVSIGVFFLILLIIAIVCIRRRSKKKKQQQQQKLYYYGGDAPDQQKTNYYYNNNNGGKNQNYYGGGGGPANQEHVVRMPNGMIGMGMVPGPNAGVGAAWGAQQPPQMIMSNGSDLSSNFSMGPPPLPPPSPGITLGLKAGTFTYEELAAATGNFADANMIGQGGFGYVYKGVFPNGKEVAVKTLKAGSGQGEREFQAEIEIISRVHHRHLVSLVGYCIAGGQRMLVYEFIPNNTLEYHLHGKDLPTMDWPTRMRIAIGAAKGLAYLHEDCHPRIIHRDIKAANVLIDSSFEAKVADFGLAKLTTDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLEIITGKRPVDLSGAMDDSLVDWARPLLIRGLEEDGNFGELVDPCLEGNYNKQEMTRMAACASSSIRHSAKKRPKMSQIVRALEGDVSLDDLKNMGKAGAIGGSGGGVLNPSGGGSSDYDTMQYNADLQKFRKTVFSSPENTSGSSGERP 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00993 624 Gene3D Phosphorylase Kinase; domain 1 264 359 - -
Arst5g00993 624 Gene3D Transferase(Phosphotransferase) domain 1 360 569 - -
Arst5g00993 624 FunFam proline-rich receptor-like protein kinase PERK1 262 359 - -
Arst5g00993 624 MobiDBLite consensus disorder prediction 33 48 - -
Arst5g00993 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
Arst5g00993 624 ProSitePatterns Protein kinases ATP-binding region signature. 290 312 IPR017441 GO:0005524
Arst5g00993 624 SMART serkin_6 284 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00993 624 Pfam Protein tyrosine and serine/threonine kinase 288 556 IPR001245 GO:0004672|GO:0006468
Arst5g00993 624 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 135 608 IPR047117 -
Arst5g00993 624 MobiDBLite consensus disorder prediction 1 24 - -
Arst5g00993 624 FunFam Proline-rich receptor-like protein kinase PERK1 360 568 - -
Arst5g00993 624 MobiDBLite consensus disorder prediction 1 115 - -
Arst5g00993 624 MobiDBLite consensus disorder prediction 574 595 - -
Arst5g00993 624 ProSiteProfiles Protein kinase domain profile. 284 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00993 624 MobiDBLite consensus disorder prediction 49 88 - -
Arst5g00993 624 SUPERFAMILY Protein kinase-like (PK-like) 263 557 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00993 Arst-Chr5 9588043 9590843 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00993 272 610 Trihelix Transcription Factor Family AT1G70460 60.882 2.85e-145 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Arst5g00993 PK_Tyr_Ser-Thr 6.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00993 - - gmx:100777163 650.588