Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00992 ATGTCGTCTAAATCTGCTCCTCATAATAGATTTCCTGATAACGCCACACCGGATAATGCCACGCCGGACGATGCCACACCGGACAATGCCACGCCGGACAATGCCACGCCGGATAATGCTACACCGGATAATGCCACGCCTGATGATGCTGATGGATCAGACTCGAAGAAGCCGTCGTCATCATCACCTTCTCCTCCGAATAATACTCCTGCTACTCCTTCTACTCCTTCTACTACCACTACTCCTCCTCCTCCGGAGGGACGTTCTGGCTCATCACAACATAGCAAACAATTAGCACCGCCGTCTAAAGATTCTTCAAGCTCTACTAACTCAGGATCTATTGCAGCATTCGTTGTGATAGGGATAGTGTTTGTTTTCTTCCTCATTGTGGCCATCATTTGCATTAGAAGGAGGTCCAAAAGGAAGAAACAGAAGATGTACTTTTATGGTGGTGGAGATAAATCTACTGACCAACTAAATCTGAATAATAACTACAGCGGGCAGAGCCAAAGTTACTATGGAGGTAGCCAAAACCAAAACCATGTTGTGAGAATGCAAAACGGTGGTGATAGTGGTGGTTGGGGTTCATCACCCACTCCTCTGATGATGAACAGTGCCGAAATGAGCTCGAATTACTCGACTGGATCTCATTTGCCTCCTCGCCTTTCACTGGGTCTCAACAGCGGCACCTTCAGCTACGAAGAACTAGCTCTGGCCACAAGCAACTTCGCAGAGTCAAATATGATAGGACAAGGTGGATTTGGTTATGTCTACAAAGGTGTCTTGCCTAACGGAAAGGAAGTGGCGGTTAAGACCCTCAAGAGTGGTAGCGGCCAAGGCGAGCGCGAGTTCCAGGCTGAGATTGAGATCATCAGCCGTGTTCATCATCGCCATCTTGTTTCTCTTGTTGGTTACTGCATTGCTGGTGGCCAGAGAATGTTGGTCTATGAATTCATCCCTAATAACACACTGGAACATCATCTTCATGCTAAGGGTCAGCCTACCATGGATTGGCCTACCAGAATGCGCATTGCCATTGGAGCTGCTAAGGGACTTGCTTATCTTCATGAAGATTGTCATCCTCGCATCATCCATCGTGACATCAAAGCTGCCAATGTCCTTATTGATAATAGCTTCGAAGCAAAGGTGGCTGATTTCGGATTGGCTAAGTTGACCACAGATAATAACACTCATGTATCTACTCGTGTCATGGGAACATTCGGGTACTTAGCTCCTGAATATGCATCAAGTGGAAAATTGACAGAGAAATCTGATGTATTCTCGTTTGGGGTGATGCTGTTAGAAATCCTAAGTGGGAAGCGCCCTGTGGATCTCTCAGGTGCCATGGATGATAGCTTAGTTGACTGGGCGCGGCCACTACTGACACGTGGGTTGGAGGAAGATGGCAACTTTGGAGAGTTGGTGGATCCATTTTTGGAAGGAAACTACAACAAACAAGAAATGACAAGGATGGCAGCTTGCGCTTCTTCCAGCATCCGTCACTCTGCTAAGAAGCGTCCAAGAATGAGTCAGATTGTAAGGGCATTGGAAGGAGATGTATCATTGGATGACTTGAAGGATGGGGGGGCTAAGCCGCCGTCTGGCAGCAATTACGCGGCTTCAAGTGGTTACAACCCTGCAACTGCGAGCTCTGGCTATGACACAATGCAATACAATGCTGATATGGCAAAGTTCAGACAAGCAGTGTTTGCAAGCCAGGAATATAGCATGAGTAGTGGTGAACAAAGCTTTAGCAAATAA 1761 0.4708 MSSKSAPHNRFPDNATPDNATPDDATPDNATPDNATPDNATPDNATPDDADGSDSKKPSSSSPSPPNNTPATPSTPSTTTTPPPPEGRSGSSQHSKQLAPPSKDSSSSTNSGSIAAFVVIGIVFVFFLIVAIICIRRRSKRKKQKMYFYGGGDKSTDQLNLNNNYSGQSQSYYGGSQNQNHVVRMQNGGDSGGWGSSPTPLMMNSAEMSSNYSTGSHLPPRLSLGLNSGTFSYEELALATSNFAESNMIGQGGFGYVYKGVLPNGKEVAVKTLKSGSGQGEREFQAEIEIISRVHHRHLVSLVGYCIAGGQRMLVYEFIPNNTLEHHLHAKGQPTMDWPTRMRIAIGAAKGLAYLHEDCHPRIIHRDIKAANVLIDNSFEAKVADFGLAKLTTDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLEILSGKRPVDLSGAMDDSLVDWARPLLTRGLEEDGNFGELVDPFLEGNYNKQEMTRMAACASSSIRHSAKKRPRMSQIVRALEGDVSLDDLKDGGAKPPSGSNYAASSGYNPATASSGYDTMQYNADMAKFRQAVFASQEYSMSSGEQSFSK 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00992 586 SUPERFAMILY Protein kinase-like (PK-like) 222 516 IPR011009 -
Arst5g00992 586 Gene3D Transferase(Phosphotransferase) domain 1 319 526 - -
Arst5g00992 586 MobiDBLite consensus disorder prediction 1 48 - -
Arst5g00992 586 ProSiteProfiles Protein kinase domain profile. 243 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00992 586 ProSitePatterns Protein kinases ATP-binding region signature. 249 271 IPR017441 GO:0005524
Arst5g00992 586 Pfam Protein tyrosine and serine/threonine kinase 247 515 IPR001245 GO:0004672|GO:0006468
Arst5g00992 586 Gene3D Phosphorylase Kinase; domain 1 209 318 - -
Arst5g00992 586 SMART serkin_6 243 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00992 586 FunFam proline-rich receptor-like protein kinase PERK1 221 318 - -
Arst5g00992 586 FunFam Proline-rich receptor-like protein kinase PERK1 319 527 - -
Arst5g00992 586 MobiDBLite consensus disorder prediction 84 110 - -
Arst5g00992 586 ProSitePatterns Serine/Threonine protein kinases active-site signature. 363 375 IPR008271 GO:0004672|GO:0006468
Arst5g00992 586 MobiDBLite consensus disorder prediction 63 83 - -
Arst5g00992 586 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 122 568 IPR047117 -
Arst5g00992 586 MobiDBLite consensus disorder prediction 1 110 - -
Arst5g00992 586 MobiDBLite consensus disorder prediction 523 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00992 Arst-Chr5 9562677 9566320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00992 60 583 Trihelix Transcription Factor Family AT1G70460 47.290 1.40e-151 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Arst5g00992 PK_Tyr_Ser-Thr 5.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00992 - - gmx:100777163 650.588