Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00973 ATGAGAGTTAACAATAACACGACATCAAACCCGAAACCCGTAGAAAGCACAATCGGCCTCGAGCCCACATCGGTGCTGGACCTGTGTAGAAGTCCCACCCCTGAGAAGGCAGTGGCTGCGCTGGTGGCTACTGCACCCAACACACAGCAAGAGTGTCTTGACCAGCTGGAGGACCATGTGCTTCACAATCTTGATTGGGACTCCATCATGAAGGATCTTGGATTCCATGAAGACTCCAACCCACCCTTGTTCAAGACCACCCTCCCTAATGTCCCTGACTTCTCTCCTTCCTTCGACCCACACTCCGAATTTCCAGACATCCAAACCATGTCCTACAACTACGCCAACGCCACTGCCACCCTCGACCACCTCCTCCATGACACCTCCAATAATTCTGCCGCCACCGGCTTCGATTTCATAGAAGAGCTCATCCGTGCTGCCGATTGCTTCGACACCAACCACCTCCACGTCGCTCACGTCATATTGGAGCGACTCAATCAACGCCTCCGATCCCCTGCGGGTGCAAAGCCTCTCCAACGCGCCGCCTTCTACTTCAAGGAAGCTCTCCAGGGCCTCCTCTCCGGTTCCAATCGCACTCCGCGTTTCTCCTCCCTCGTTGAGATCGTCCACTGCGTCAGAACATTCAAGGCCTTCTCTGGAATCTCGCCGATCCCTATGTTCTCCATCTTCACCACCAACCAGGCGCTCCTTGAGGCTTTTCATGGCTCCTCCTTCATGCACGTCCTTGATTTTGATATCGGATTAGGGATCCAGTATGCTTCGCTCATGAAGGAGATTGCAGAAAAGGCGGATTCCTTGAAACACGGATCGCCGCTTCTGCGCATCACCGCCGTGGTTCCCGAAGAGTACGCCGTCGAGAGCAAACTGATTCGGGAGAATCTCAGCCAGTTCGCGCACGAGCTCAGGATCCGCGTCCAGGTCGAGTTTGTGCCCCTCTGCAACTTCGAGACGCTGTCTTTTAAGGCGGTGAAGTTCGTCGATGGCGAGAAAACCGCCGTTCTTCTCTCGCCGGCGATATTCCGACGGCTCGGTTCCGCTGGGAGCACCGCGGCCTTCCTGGCGGACGTTCGGAGGGTTTCGCCGAGCGTGGTGGTGTTCGTGGACGGGGAGGGGTGGACGGAAGCTGCGGCAGCGGCGTCGTTCCGGCGCGGCGTGGTGAGCAGCCTAGAGTTCTACTCGATGATGCTGGAGTCGCTGGACGCGTCGATGGTTGCGGGAGGGGAGTGGGTGAGGAGGATCGAGATGCTTCTGCTGCGCCCGAAGATACTAGCGGCGGTGGAGGGAGCGGGGCGGAGGGTTCCGCCGTGGAGAGAGGCTTTCTATGGTGCCGGAATGAGGCCGGTGCAGTTAAGCCAGTTCGCAGATTTTCAGGCGGAGTGCTTGCTGGCTAAGGTGCAAATCAGGGGCTTCCACGTGGCAAAACGCCAAGCTGAGCTTGTGCTCTTCTGGCACGAGAGGGCCATGGTTGCCACGTCAGCTTGGCGATGT 1509 0.5765 MRVNNNTTSNPKPVESTIGLEPTSVLDLCRSPTPEKAVAALVATAPNTQQECLDQLEDHVLHNLDWDSIMKDLGFHEDSNPPLFKTTLPNVPDFSPSFDPHSEFPDIQTMSYNYANATATLDHLLHDTSNNSAATGFDFIEELIRAADCFDTNHLHVAHVILERLNQRLRSPAGAKPLQRAAFYFKEALQGLLSGSNRTPRFSSLVEIVHCVRTFKAFSGISPIPMFSIFTTNQALLEAFHGSSFMHVLDFDIGLGIQYASLMKEIAEKADSLKHGSPLLRITAVVPEEYAVESKLIRENLSQFAHELRIRVQVEFVPLCNFETLSFKAVKFVDGEKTAVLLSPAIFRRLGSAGSTAAFLADVRRVSPSVVVFVDGEGWTEAAAAASFRRGVVSSLEFYSMMLESLDASMVAGGEWVRRIEMLLLRPKILAAVEGAGRRVPPWREAFYGAGMRPVQLSQFADFQAECLLAKVQIRGFHVAKRQAELVLFWHERAMVATSAWRC 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00973 503 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 138 497 IPR005202 -
Arst5g00973 503 ProSiteProfiles GRAS family profile. 130 502 IPR005202 -
Arst5g00973 503 Pfam GRAS domain family 140 502 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00973 Arst-Chr5 9365431 9367080 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00973 56 502 GRAS Transcription Factor Family AT4G36710 54.968 7.40e-164 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Arst5g00973 GRAS 3.8e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00973 - - aip:107640116 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00973 5 9365431 9367080 Arst5g00973 5 9365431 9367080 ECH