Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00943 ATGCGGCTCTTTTTCCTCTTCATCATCATCATCACCATCACCAACTTGTCTCTGATAAAGGGACAGCAACCTTACATTGGTTTAGGGACAGTAGCATGTCCTCGAAGGGGTAACGCAAAATCAATCCGAGGCTACACTTGCAACGGTTTAAACCACAGTTGCCAAGCTTACCTCACATTCAGATCCCAACCACTCTACAGTTCTGTCTCTACAATCTCTTCTCTGTTAAACTCTGACCCTTCACAACTCGCTCTCATCAACTCCGTTTCTTTAAACGACACCTTCGAACCAAACACGCTTGTCATTGTTCCCGTTAACTGCTCCTGTGCCTCCGAGTATTACCAATCAAACACATCCTATGTTTACCACAATGCTGAAACCTACTTCTTAATTGCCAACAACACCTTCCAAGGACTCACCACGTGTCAAGCTATGATGCACCAGAATGCTAACCTTTCTAACCTATACCCTGGAAGACAACTTGCTGTTCCTCTTAGATGTGCTTGTCCCACAAAGAATCAAACTCTCAAAGGTGTTAGGTACCTCTTGAGTTACCTTGTTGATTGGGGTGATTCTGTTTCTTTCATTAGTCAAATGTTCAATGTCACTACTCAGATCACTCTTGATGCTAATTCCCTTACTATGAGTTCTTTCATCTATCCCTTTACCACTATTCTAGTCCCTCTTCATGATAAGCCCCTCAAACTTCGAACTTCTTCGCCATCATCTCAACCACCTTCTTCTTCTGATTCTAGTTCAACAGATAAAAGCTCAAAGAAAACATGGGTTTATGTTGTTGTTGGAGTTGTTGGTGCCTTTGCCTTAATATTTGTTACTTGTGCTGTCATTTTCTTCACACACACTCGCAAAACTAAAAGGAAACAAGAGGTTGTTGCAGTTTCTAAGAGTTTTGAGGCAATTGAGAAACCACAAGGGAAGATAATGGAGCAAGAATCTGGAAAATTGTCAGAGATCATAGCTAGCATAGCTCAATCTTTTAAGGTGTATGATTTTGAGGAACTGGAGCGTGCAACGGATAACTTTAGCACAAGTTGCTTGATCAAAGGATCGGTTTATCGCGGAGTTATCAATGGTGATCTTGCTGCAATCAAGAAGGTAGAAGGAGATATCTCAAAGGAGATTCAAGTTCTGAATAAAGTCAACCATTCCAATGTTATACGCCTCTCCGGTGTCAGCTTCTACCAAGGCCAATGGTATCTTGTTTATGAGTATGCTGCTAATGGAGCCTTGAGTGAATGGATCTACATGGACAACGTTGATGGCAAGTTTCTAAGTTGGAGGCAGAGGATTCAGATTGCTTTGGATGTGGCTACAGGACTTGACTATCTTCACAGCTTCACTTCTCCTTCATATATTCACAAGGATCTCAAGTGTAGCAACATTCTTTTGGACAGTGAGTTAAGGGCAAAGGTTGCAAACTTTAGCCTTGCAAGGTCTGTGGAAGGAGAGAATGGTCAATTTCCAATGACAAGGCATATTGTAGGGACAAGGGGTTACATGGCTCCTGAGTATTTGGAGAATGGTGTTGTATCCACAAAGATTGATGTGTATGCATTTGGAGTTCTGGTGCTAGAAATCCTCACTGGAAAAGAGGTTGCTGAAATCTTGAATGAAGATGACAATAACAATAAGGGTTTTTCAAATGCTTTGAGTATTATTCTTAGTGAGGAAAGTGGCAAGGAGAGGGTGAAGGAGTTTATGTATGCTTCTCTTCATGGGAATTATCCATCAGAACTTGCTACGGTTGTGATTGGAATGATTCATAATTGTGTAGAGAAAGAGCCAGAAAATAGACCACAGATGCAGGAGATTGTTGCATCTCTGTCCAGAATATTGAACTCTTCATTGAATTGGGAAACCTCAGTGAGCATCTCAGCATCCCAAAGCTTTTGA 1914 0.4143 MRLFFLFIIIITITNLSLIKGQQPYIGLGTVACPRRGNAKSIRGYTCNGLNHSCQAYLTFRSQPLYSSVSTISSLLNSDPSQLALINSVSLNDTFEPNTLVIVPVNCSCASEYYQSNTSYVYHNAETYFLIANNTFQGLTTCQAMMHQNANLSNLYPGRQLAVPLRCACPTKNQTLKGVRYLLSYLVDWGDSVSFISQMFNVTTQITLDANSLTMSSFIYPFTTILVPLHDKPLKLRTSSPSSQPPSSSDSSSTDKSSKKTWVYVVVGVVGAFALIFVTCAVIFFTHTRKTKRKQEVVAVSKSFEAIEKPQGKIMEQESGKLSEIIASIAQSFKVYDFEELERATDNFSTSCLIKGSVYRGVINGDLAAIKKVEGDISKEIQVLNKVNHSNVIRLSGVSFYQGQWYLVYEYAANGALSEWIYMDNVDGKFLSWRQRIQIALDVATGLDYLHSFTSPSYIHKDLKCSNILLDSELRAKVANFSLARSVEGENGQFPMTRHIVGTRGYMAPEYLENGVVSTKIDVYAFGVLVLEILTGKEVAEILNEDDNNNKGFSNALSIILSEESGKERVKEFMYASLHGNYPSELATVVIGMIHNCVEKEPENRPQMQEIVASLSRILNSSLNWETSVSISASQSF 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00943 637 CDD LysM 184 227 IPR018392 -
Arst5g00943 637 ProSiteProfiles LysM domain profile. 183 227 IPR018392 -
Arst5g00943 637 FunFam PTI1-like tyrosine-protein kinase 3 412 629 - -
Arst5g00943 637 ProSiteProfiles Protein kinase domain profile. 311 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00943 637 SMART serkin_6 348 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00943 637 Gene3D LysM domain 169 235 IPR036779 -
Arst5g00943 637 Pfam LysM domain 189 228 IPR018392 -
Arst5g00943 637 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Arst5g00943 637 SUPERFAMILY Protein kinase-like (PK-like) 329 615 IPR011009 -
Arst5g00943 637 Pfam Protein kinase domain 366 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00943 637 Gene3D Phosphorylase Kinase; domain 1 319 411 - -
Arst5g00943 637 MobiDBLite consensus disorder prediction 236 256 - -
Arst5g00943 637 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 3 628 - -
Arst5g00943 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Arst5g00943 637 Gene3D Transferase(Phosphotransferase) domain 1 413 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00943 Arst-Chr5 8963973 8966251 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00943 5 628 Receptor kinase-like Gene Family AT2G23770 43.868 1.12e-171 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Arst5g00943 Pkinase 1.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00943 - - gmx:100815842 842.802