Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00942 ATGGCTTTCTTTCTACCCTCTCTCTCAAGTAGTATTTTTCTTGCATTCATGTTGTTCTCCATCACCAGCATCCCAACTCAATCACAACAGGTTAATGGAACAGACTTTTCATGCCCAGTGGATTCACCTTCATCCTGTGGAACATATGTGACATACATTGCTAAATCTCCAAACTTCTTGAGCCTTTCTAACATATCTGACATATTTGACACCAGCCCTTTATCCATTGCAAGAGCAAGTAACATAAAGAATGAGGGTGACAAGCTGGTTCCAGGCCAAGTCTTACTGATACCTGTCACTTGTGGTTGCACTCAAAACCAATCTTTCGCCAATATTACCTATGAGCTAAGGCAGGGTGATGTGTACGACGTTGTCTCAAAAACAACATATGAGAATCTCACAAATTGGCGTGCTGTCAACGATTCAAACCCAGATTTGAATCCAGTTCTGCTGCCAATAGGTGTGAAAGTATTGTTCCCTTTATTCTGCAGGTGCCCTTCTAAGAAACAGTTACAGAAAGGGATAGAATATATGATCACCTATGTGTGGCAGAACAATGACAATGTTTCCTCTGTAGCAGCCAAGTTTGGTGCATCGCCGGTGGACATATTGTCCGAAAACAACTACGGTGGAAACTTCACAGCTGCAACCTATCTTCCGGTTTTGATTCCTGTGACGAAGTTGCCAGTTCTTACTCAACCCGAGGCTTCACATGGAAGAAAGAGAAGCATTCAAATCCCTGTTATAATTAGTATTAGCCTGGGGTTCACCCTTGTTGTTGCTGTTATAGTAATATCAATGGTTTATGCTTATCTTTATCAGAGAAAGAGGACTTTGAATAGGAGAGACTTATCTGCTGGGACAGCAGATAAGCTACTCTCTGGAGTTTCAGGCTACGTGAGTAAGCCAACCGTGTATGAAGCCAATGAGGTTATCAAAGCCACCATGAATCTCAGCGAACAGTGCAAGCTTGGGGGCACAGTTTACAAGGCCAAAATAGAAGGGCAGGTCTTGGCAGTGAAAAAAGTGAATCAAGTAGTTTCTGAGGAGCTGAATATTCTGCAGAAGGTGAATCATGGAAACCTGGTGAAACTGATGGGTGTATCTTCAGACAGTGATGGAAACCATTTCCTGGTTTATGAGTATGCTGATAACGGGTCCCTTGATGAGTGGCTTTTCTCCAAGTTGTCTTTGAAGGCCTCGCTTACATGGTATCAGAGGATTAACATAGCATTGGATGTTGCCATGGGTCTGCAGTACTTGCATGAGCACACTTATCCAAGAATAGTCCATAGGGACATCACAACAAGTAACATCCTTCTTGACTCCAACTTCAAGGCCAAGATAGGGAACTTCTCCATGGTCAGAACTACTACGAATCCCATGATTTCCAAGATCGATGTCTTTGCTTTCGGGGTTGTTCTCATTGAGTTGCTGACAGGCAAGAAAGCCATGACAACAAAGGCAGATGGCGAGGTAGTAATGCTGTGGAAGGATATTAGGAAGATGTTTGAAGTGGAAGACGAAAAGGAAAAGGAGGAGTGTCTGAGAAGATGGATGGATCCTAAGCTAGAGTGCCTTTACCCTGTGGATTATGCTCTCAGCTTGGTCACGTTGGCCGCGAATTGCACGGCCGATGTATCATTGTCTAGACCAACCATGGCAGAAGTTGTTCTTGGCCTCTCCCTTCTCACTCAACCATCTCAAGCTGCACTAGAGAGATCATTGACTTCTTCTGCGTTGGAAGCAGAGGTTACTCATGTGGCTACTCCCATAGCAGCACGTTAA 1788 0.4396 MAFFLPSLSSSIFLAFMLFSITSIPTQSQQVNGTDFSCPVDSPSSCGTYVTYIAKSPNFLSLSNISDIFDTSPLSIARASNIKNEGDKLVPGQVLLIPVTCGCTQNQSFANITYELRQGDVYDVVSKTTYENLTNWRAVNDSNPDLNPVLLPIGVKVLFPLFCRCPSKKQLQKGIEYMITYVWQNNDNVSSVAAKFGASPVDILSENNYGGNFTAATYLPVLIPVTKLPVLTQPEASHGRKRSIQIPVIISISLGFTLVVAVIVISMVYAYLYQRKRTLNRRDLSAGTADKLLSGVSGYVSKPTVYEANEVIKATMNLSEQCKLGGTVYKAKIEGQVLAVKKVNQVVSEELNILQKVNHGNLVKLMGVSSDSDGNHFLVYEYADNGSLDEWLFSKLSLKASLTWYQRINIALDVAMGLQYLHEHTYPRIVHRDITTSNILLDSNFKAKIGNFSMVRTTTNPMISKIDVFAFGVVLIELLTGKKAMTTKADGEVVMLWKDIRKMFEVEDEKEKEECLRRWMDPKLECLYPVDYALSLVTLAANCTADVSLSRPTMAEVVLGLSLLTQPSQAALERSLTSSALEAEVTHVATPIAAR 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00942 595 Pfam Protein tyrosine and serine/threonine kinase 344 459 IPR001245 GO:0004672|GO:0006468
Arst5g00942 595 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 12 569 - -
Arst5g00942 595 Pfam LysM domain 61 98 IPR018392 -
Arst5g00942 595 ProSiteProfiles LysM domain profile. 50 97 IPR018392 -
Arst5g00942 595 ProSitePatterns Tyrosine protein kinases specific active-site signature. 429 441 IPR008266 GO:0004672|GO:0006468
Arst5g00942 595 FunFam Os07g0541700 protein 383 468 - -
Arst5g00942 595 Gene3D Phosphorylase Kinase; domain 1 294 382 - -
Arst5g00942 595 Gene3D LysM domain 61 110 IPR036779 -
Arst5g00942 595 SUPERFAMILY Protein kinase-like (PK-like) 304 565 IPR011009 -
Arst5g00942 595 Gene3D Transferase(Phosphotransferase) domain 1 461 582 - -
Arst5g00942 595 Gene3D Transferase(Phosphotransferase) domain 1 383 460 - -
Arst5g00942 595 ProSiteProfiles Protein kinase domain profile. 286 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00942 Arst-Chr5 8961649 8963656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00942 80 564 Receptor kinase-like Gene Family AT3G21630 31.599 9.80e-70 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Arst5g00942 PK_Tyr_Ser-Thr 2.5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00942 - - gmx:100301877 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00942 5 8961649 8963656 Arst5g00942 5 8961649 8963656 ECH