Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00930 ATGGAGCACGCCGAATTATCCACTGAACAGGTTCTGAGGAGGGACATCCCATGGGAGACCTACGTGTCCACTAAGCTCATCTCTGGTACAACCCTTCAGCTCCTACGCCGTTACGACCATCGTTCTGAAACCCACCGTGCCCAATTGCTACATGAGGATGGTCCGGCTTATGTTCGCATGTTTGTTCATGTATTGCGTGATATTTTCAAAGAAGAGACTGTAGAATATGTTCTAGCTTTGATAGATGAGATGCTCACAGCCAATCCTAAAAGAGCAAGACTGTTTCATGACAAGACCCTTGCAGATGAAGACACTTATGAACCTTTCTTAAGGTTGCTTTGGAGAGGAAATTGGTTCATACAAGAGAAAAGTTGTAAGATCCTTGCTTTAATAGTTAGTACCAGGCCCAAAAATCAGAATGGCGGTGTTGTAAATTCAGAATCAAACTCAAAGAAAGCATTTACCACGATTGAAGATGTTCTAGGAGGATTGGTAAAATGGCTTTGCGAACAGTTGAAGAAGCCTTCTCATCCTGCACGGGGTGTTCCAACTGCCATCAATTGCCTGGCAACTCTACTTAAGGAACATGTGGTTAGGTCTTCCTTTGTTCAAGCAGATGGAATCAAGTTGCTTGTACCTTTGATTTCTCCTGCATCCACCCAACAGTCTATTCAGCTTCTTTATGAAACATGTCTCTGTGTATGGCTCTTATCCTACTATGAACCGGCAATTGAATACTTGACTACCTCAAGAACCCTTCCTTCTCTTGTTGATGTTGTTAAGAGTTCTACAAAAGAGAAGGTTGTTAGAGTTGTTGTCCTTACCTTTAAGAACTTGCTATCAAAAGGGACATTGGCTGCTCAAATGATTGACCTTCAGCTACCACAAGTTGTTCAGAGTTTGAAAGCACAAGCATGGAGTGATGAGGACTTGTTGGAGGGATTGAATTACCTGGAGGATGGGCTTAAGGATAGCATTAAGAAATTAAGTTCTTTTGATGTGTATAAGCAAGAAGTTCTCCTTGGCAATCTGGATTGGTCTCCCATGCACAAAGATCCCATATTTTGGCGAGATAATATTGCCCATTTTGAAGAGAATGACTTCCAGATTATAAGGGTTCTAATAACAATTTTGGACACTGGTAGCAATCCAAGGACTTTGGCTGTTGCTTGCTTTGACCTTTCGCAGTTCATCCAGCACCATCCTTCTGGGCGTCTCATTGTGGCGGACCTCAAGGCGAAGGAACGAGTAATGAAACTAATGAATCATGAGAATGCTGAAGTTACTAAGAATGCGCTGCTCTGCATCCAAAGACTTTTCTTAGGTGCAAAGTATGCCAGCTTCTTGCAGGCTTAG 1356 0.4263 MEHAELSTEQVLRRDIPWETYVSTKLISGTTLQLLRRYDHRSETHRAQLLHEDGPAYVRMFVHVLRDIFKEETVEYVLALIDEMLTANPKRARLFHDKTLADEDTYEPFLRLLWRGNWFIQEKSCKILALIVSTRPKNQNGGVVNSESNSKKAFTTIEDVLGGLVKWLCEQLKKPSHPARGVPTAINCLATLLKEHVVRSSFVQADGIKLLVPLISPASTQQSIQLLYETCLCVWLLSYYEPAIEYLTTSRTLPSLVDVVKSSTKEKVVRVVVLTFKNLLSKGTLAAQMIDLQLPQVVQSLKAQAWSDEDLLEGLNYLEDGLKDSIKKLSSFDVYKQEVLLGNLDWSPMHKDPIFWRDNIAHFEENDFQIIRVLITILDTGSNPRTLAVACFDLSQFIQHHPSGRLIVADLKAKERVMKLMNHENAEVTKNALLCIQRLFLGAKYASFLQA 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00930 451 PIRSF V-ATP_synth_H 1 450 IPR004908 GO:0000221|GO:0046961|GO:1902600
Arst5g00930 451 FunFam V-type proton ATPase subunit H 342 443 - -
Arst5g00930 451 Pfam V-ATPase subunit H 3 322 IPR004908 GO:0000221|GO:0046961|GO:1902600
Arst5g00930 451 CDD VATPase_H 3 445 - -
Arst5g00930 451 Gene3D - 3 330 IPR011989 -
Arst5g00930 451 Pfam V-ATPase subunit H 328 440 IPR011987 GO:0000221|GO:1902600
Arst5g00930 451 SMART arm_5 194 239 IPR000225 GO:0005515
Arst5g00930 451 SMART arm_5 401 441 IPR000225 GO:0005515
Arst5g00930 451 SMART arm_5 240 281 IPR000225 GO:0005515
Arst5g00930 451 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 2 450 IPR004908 GO:0000221|GO:0046961|GO:1902600
Arst5g00930 451 Gene3D - 343 443 IPR038497 -
Arst5g00930 451 SUPERFAMILY ARM repeat 8 441 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00930 Arst-Chr5 8825202 8830542 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00930 1 451 Primary Pumps ATPases(2) AT3G42050 76.275 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00930 K02144 - gmx:100796479 782.711