Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00926 ATGGGTTGGTTATCCAAGTTGCTTAAGGGCTCTAACCATAGAACTTCAAGAGGGCAATACCATGGCAAATATGGAGAGGACAGAATTTGGGATAACCATCATGCTTCAGTGGATGATTTGAATGATGTTGAGAAAGAGGACATTGATTGTGCAATTGCACTCTCTCTGTCAGAGCAGGATCAGAAAGGAAAAAGTGTTGTTGTCTATGATATCGCAGAGGACGACTCTCAATCCGAAGAAGATGAACAACTTTGTAAAGTTGATGATGAGGAAGATGAGCATACTTGTACAGTTCAACAACAAGAAGAAGAACATCTTGATAAGGTTCGGCCGGATGAAGATGATGAACATCTTTCTAAAGATCAACTTGAGGAAGATGAGCAACTTGCCAGGGCAATCCAAGAAAGTTTGAACATTGATTCTCCTCCTAGTCCTAGATATGAGAATGATTCTATTTTCCAACCTTTATCAAACCTCTTTCCACCAGGATACAGAATCTGTGCTGGATGCAAAGCTGAAATTGGGCATGGAAGATTTTTAAGTTGCATGGGAGCTGTTTGGCATCCACAATGTTTTCGCTGCAATGCTTGCAATCTTCCAATAACAGATTATGAGTTTTCCATGTCTAGCAATTGCCCCTACCATAAATCTTGCTACAGGGAGCAACACCACCCAAGATGTGATGTTTGCAATAACTTTATTCCAACTAATTCAGCTGGTCTCATTGAGTATAGAGCTCATCCTTTCTGGCTACAAAAATACTGTCCATCGCATGATCGAGATGGAACTCCTCGGTGTTGTAGCTGCGAAAGAATGGAGCCAAGGGATGCAAAGTATCTTTTGCTTGATGATGGTAGAAAGCTATGTTTAGAGTGTCTGGACTCATCAATCATGGATACTCATGAATGCCAACCTCTCTACCTTGAAATACAAGAGTTCTATGAAGGTTTAAACATGAAAGTTGAGCAGCAAGTTCCTATGCTTCTGGTTGAGAGACAAGCACTGAATGAGGCCATGGAGGGAGAAAAGAATGGTCATCACCACTTGCCTGAAACTAGAGGACTGTGTTTGTCAGAAGAGCAAACTGTCACCTCGATTTCAAGGAGACCAAAGATAGGAGCAGGCCATCGAGTCGTGGATATGGTAACAGAGCCTTTTAGGCTGATCCGTCGATGTGAAGTGACAGCCATTCTTGTGTTGTATGGCCTTCCTAGGTTGTTGACAGGATCAATCCTGGCTCATGAGATGATGCATGCATGGCTCAGGCTTAAAGTTATGTGTCTTTTACAGGTTATCCCAATCTGA 1305 0.4222 MGWLSKLLKGSNHRTSRGQYHGKYGEDRIWDNHHASVDDLNDVEKEDIDCAIALSLSEQDQKGKSVVVYDIAEDDSQSEEDEQLCKVDDEEDEHTCTVQQQEEEHLDKVRPDEDDEHLSKDQLEEDEQLARAIQESLNIDSPPSPRYENDSIFQPLSNLFPPGYRICAGCKAEIGHGRFLSCMGAVWHPQCFRCNACNLPITDYEFSMSSNCPYHKSCYREQHHPRCDVCNNFIPTNSAGLIEYRAHPFWLQKYCPSHDRDGTPRCCSCERMEPRDAKYLLLDDGRKLCLECLDSSIMDTHECQPLYLEIQEFYEGLNMKVEQQVPMLLVERQALNEAMEGEKNGHHHLPETRGLCLSEEQTVTSISRRPKIGAGHRVVDMVTEPFRLIRRCEVTAILVLYGLPRLLTGSILAHEMMHAWLRLKVMCLLQVIPI 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00926 434 Pfam LIM domain 167 222 IPR001781 -
Arst5g00926 434 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 160 192 - -
Arst5g00926 434 FunFam Protein DA1-related 1 161 220 - -
Arst5g00926 434 ProSiteProfiles LIM domain profile. 165 225 IPR001781 -
Arst5g00926 434 Gene3D Cysteine Rich Protein 161 225 - -
Arst5g00926 434 SMART uim 43 62 IPR003903 -
Arst5g00926 434 SMART uim 124 143 IPR003903 -
Arst5g00926 434 PANTHER PROTEIN DA1-RELATED 2 3 426 IPR045218 -
Arst5g00926 434 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 193 248 - -
Arst5g00926 434 Pfam Protein DA1 316 426 IPR022087 -
Arst5g00926 434 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 124 143 IPR003903 -
Arst5g00926 434 ProSitePatterns LIM zinc-binding domain signature. 167 201 IPR001781 -
Arst5g00926 434 SMART lim_4 166 218 IPR001781 -
Arst5g00926 434 MobiDBLite consensus disorder prediction 1 23 - -
Arst5g00926 434 CDD LIM_DA1 167 219 - -
Arst5g00926 434 MobiDBLite consensus disorder prediction 98 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00926 Arst-Chr5 8797501 8801267 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst5g00926 DA1-like 2.8e-57 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00926 - - gmx:100817969 724.546