Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00925 ATGTCCCATCAGCAAGATTACCAAGAGATCGACGGTAACACACCAACAAGCACAGATCCGAAGGGACAACAACAAAGGCTTCGATGCACCGCCACCACCATTAGTAGGGATAGACGAGGAAGAAGAACAAGCAGGAGGAGCTGCAGGAGGAGGCCTTCCCCATGTGTATGAAACCGCAGGCATGCTTTCGGAGATGTTCAATTTCCCTGCCACCGAGCTCCTGGAACAGCAGCACCACCACTTCCGCTCCCCTTCTTCGTCGAGGCCACAACCACCAGAGAACTGGTACGGAAGCAGGCAAGGCATGATAGCCACCACCACGACGGGGTTTGGAGGAGACTCCAAGCAGCAGATTTCAAGCATGAATGCGGATTCAGCAGCAGCCATGCACCTTTTCCTGATGAACCCAGCTCAAAGGAGATCTCCTTCGCCTCCTCCATCGGCAACCTCTTCCACTCTCCACATGCTTCTTCCCAACCATTCCTCCAACTCCTTGCAAGGGTTCCCTCCTGCTGGCTCCGCAGGAGGGTCTTTCGGGCAATTCACATGGGTTCCCGACAGCGGCGCCGGCCATGAGGGAGCAGCTAACAACCCTCCTGGCCATCACGAGATTAACGTGGTGGAAGGGCAAGGCCTTTCGCTGTCGCTTTCGTCTTCGCTTCAGCACTTGGAAGCTGCGAAAGCGGAGGAACTGAGGATGGGAGAAGGCGGTTTTCTGTTTTACAATCAAGGGGGAGGGGCGGCGGCGGCTTCTAATTCGGGTCATTTTCCGTACAAGAACCATTTGCAAGGTGGCATGGTAGGACAGGGGCACCTTGCTGGGTTCCCTTCTGCTTCATCTTCTTCGTCCTTAGGTGTAGTCCACGTTCTTAGGAATTCAAAGTATGTGAAAGCCGCACAAGAGTTGCTTGAGGAGTTTTGCAGTGTTGGAAGGGGCCACTTGAAGAAAAACAAGTTCAGTAGGCAGAATTCAAACCCTAATTCCACCGCCTCTCCTTCATCTTCCAAAGATCCTCCTCCGGCTGCAGCTCCACCTCCGCCTCCTTTGTCAGCTTCCGACAGGATTGAGCATCAGAGAAGGAAGGTCAAACTTCTATCAATGCTTGATGAGGTGGACCGAAGATACAACCACTACTGCGAGCAAATGCAGATGGTGGTGAACTCATTTGACGTGGTGATGGGGTACGGGGCGGCGGTGCCGTACACGGCGCTGGCGCAGAAGGCGATGTCGAGGCATTTCCGGTGCCTGAAGGACGCAATAACGACGCAGCTGAAGCATTCGTGCGAGGTGCTGGGGGAGAAGGGGGGCGGGATGGAACAAGAAGCTTGGAGACCTCAGAGAGGCTTGCCTGAACGTTCTGTCAACATTTTGAGAGCTTGGCTTTTTGAGCATTTTCTCCACCCGTATCCAAGCGATGCAGATAAGCATCTCTTGGCGAGGCAGACTGGCCTCTCCAGAAATCAGGTATCAAACTGGTTCATAAATGCCAGGGTTCGGTTGTGGAAACCTATGGTGGAAGAGATGTACCAACAAGAACAAAAAGAAGCAGAGGAGTGTGGGGCAGCGGAAGAAGGCGAAGAAGAGGAAGAAGAAGAACAAAACAACAGCAGCAACGGTGGGCAGCAACAAGCACAAAATCCAAGCACAACGAGTGGCGGTGAAAGCGAAATACAAGTAGAAGGGTTTTCGGAAAACCAAGAGGGAATGGTTGCGCAAGGTGGAATGGCGTCGGAGATGATGCCCCCACAACAGTCACAGAGATCGATGGCAAGCGATGACACGTGTCGACATGGCAGCTACGTAGCAGGTGCTGAATATGGGACCGCGTCTACTACTGCTGCTGCTGCCGCTGCTGACATTGGATCCGCTACCCTCATTAGGTTCGGGACCACCGCCGGTGACGTGTCACTCACCCTAGGGTTACGCCACGCCGGGAACGTCCCCCGACAAAACCCCTTTTTCTCTTAG 1969 0.5378 MSHQQDYQQQAAGIFSFTNGFERSTVTHQQAQIRRDNNKGFDAPPPPLVGIDEEEEQAGGAAGGGLPHVYETAGMLSEMFNFPATELLEQQHHHFRSPSSSRPQPPENWYGSRQGMIATTTTGFGGDSKQQISSMNADSAAAMHLFLMNPAQRRSPSPPPSATSSTLHMLLPNHSSNSLQGFPPAGSAGGSFGQFTWVPDSGAGHEGAANNPPGHHEINVVEGQGLSLSLSSSLQHLEAAKAEELRMGEGGFLFYNQGGGAAAASNSGHFPYKNHLQGGMVGQGHLAGFPSASSSSSLGVVHVLRNSKYVKAAQELLEEFCSVGRGHLKKNKFSRQNSNPNSTASPSSSKDPPPAAAPPPPPLSASDRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDVVMGYGAAVPYTALAQKAMSRHFRCLKDAITTQLKHSCEVLGEKEXGGMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQEQKEAEECGAAEEGEEEEEEEQNNSSNGGQQQAQNPSTTSGGESEIQVEGFSENQEGMVAQGGMASEMMPPQQSQRSMASDDTCRHGSYVAGAEYGTASTTAAAAAADIGSATLIRFGTTAGDVSLTLGLRHAGNVPRQNPFFS 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00925 670 ProSiteProfiles 'Homeobox' domain profile. 455 518 IPR001356 GO:0003677
Arst5g00925 670 MobiDBLite consensus disorder prediction 149 219 - -
Arst5g00925 670 Pfam Homeobox KN domain 475 514 IPR008422 GO:0003677|GO:0006355
Arst5g00925 670 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 176 553 - -
Arst5g00925 670 MobiDBLite consensus disorder prediction 351 365 - -
Arst5g00925 670 Gene3D - 461 523 - -
Arst5g00925 670 MobiDBLite consensus disorder prediction 158 184 - -
Arst5g00925 670 MobiDBLite consensus disorder prediction 534 549 - -
Arst5g00925 670 MobiDBLite consensus disorder prediction 593 608 - -
Arst5g00925 670 SMART HOX_1 458 522 IPR001356 GO:0003677
Arst5g00925 670 MobiDBLite consensus disorder prediction 89 112 - -
Arst5g00925 670 MobiDBLite consensus disorder prediction 333 350 - -
Arst5g00925 670 CDD homeodomain 458 519 IPR001356 GO:0003677
Arst5g00925 670 FunFam BEL1-like homeodomain protein 4 461 523 - -
Arst5g00925 670 Pfam Associated with HOX 303 435 IPR006563 -
Arst5g00925 670 SUPERFAMILY Homeodomain-like 459 525 IPR009057 -
Arst5g00925 670 MobiDBLite consensus disorder prediction 526 609 - -
Arst5g00925 670 MobiDBLite consensus disorder prediction 97 112 - -
Arst5g00925 670 SMART prehox3 298 436 IPR006563 -
Arst5g00925 670 MobiDBLite consensus disorder prediction 550 577 - -
Arst5g00925 670 MobiDBLite consensus disorder prediction 331 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00925 Arst-Chr5 8754742 8761687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00925 2 94 Homeobox Transcription Factor Family AT2G23760 36.111 1.58e-07 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Arst5g00925 POX 2.8e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00925 - - adu:107487904 1150.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00925 5 8754742 8761687 Arst5g00925 5 8754742 8761687 ECH