Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00909 ATGTTTCTTCTTCATCACCACCACACAAGCTTCTTTATCGTGCTCACAATCTTGATGGCTTTGACGAGAGCACGAAACTTGACGAACTGCGATCGCCATTGCGGAGGGAAAACCCTGAACTACCCTTTTGGGTTCTCAGAAGGCTGCGAAGTGAAACTGAACTGTACCGAAGACCAAGTCAAAGTTGGCGGCTTTCTGGTTCAGAACATCACAGCTAGCACCATTTTCATCAGCATACCCGCGAAATGCAACCGCACCATGGGATCTATTAAGCCACTCTTCAATGACAATTTTGCCCCCACGTGGAACAACAGCTTCCTCGTGCAGAACTGCACGGAGGAGCAAGGTGGCTGCGTTATCCCCGCCTCCACCTTCACAGGCGGCCAGGCTGAGGTGGAGAGCTGCGACAGCAGCAGCGGTAACATCAGTTGTTTCACCCCGCAGAGCCAGAAACAGAGAAACAACGTTGTTGTTGGTGATGTTTTGAGTTACGATGAATTGAAAAACACTCGTTGCAAGTTCTTGTTCTCTTCGGTTGCTCTTGGGCAGAGCAAGGAGCTATTATTTCTGCAGTTTCAGGTGGTTGAGTTGGGGTGGTGGATTCAGGGTTCTTGTCATGATTCTGGTTGTTCTCAAAACGCTACCTGTACAGAGGTAACAAATCCTCAGGGGAAAAATAGTTCAGGGTTTCGCTGCCAGTGCCTTCATGGCTTCCAGGGAGATGGTTTCATCAACGGTACCGGTTGCCGGAGAGTTTTAAGTTGCAGTGCATCAACAGTAACATCGGGGGGATGTGGAAAAACAACCAAAATAGGTGTTATTGTTGGAGTGATCACAACTGGAGTATTGGCTGTGGCTGTTCTTCTGTCTCTTGTATGCTACTGTGCCAGGCGCCGTTCTGCTTGGTTGAGCAAACATACAACAGCAAAGCGCCTCTTGCGTGAAGCTGCAGGCAACTCCAGTGTACCTTTCTACCCTTACAAAGAAATTGAAAGAGCAACAAATTCGTTCTCTGACAAGCAAAGGCTGGGAACTGGGGCTTTTGGTACAGTTTATGCTGGAAAACTTCACAATGATGAGTGGGTTGCTATAAAAAAGATAAGGCACAGAGATACCAACGGTGTTGACCAAGTCATGAATGAGATCAAGCTCCTTTCTTCTGTGAGTCATGCTAATCTAGTTCGCCTTCTTGGTTGCTGCATAGAGGAGGGAGAGCAGATCCTTGTTTACGAATATATGCCTAATGGAACACTTTCTCAGCATCTGCAAAGAGAGAGGGGTAAAGGTCTTCCATGGACAATAAGACTTACTATTGCAACTGAAACTGCTAAAGCAATCGCATATCTTCATTCAGCAATTCATCCACCAATTTACCACAGAGACATCAAATCCAGTAATATACTCTTGGATTACAGCTTCAAATCTAAAGTTGCCGATTTTGGGCTTTCTAGGCTTGGCATGACAGAAACATCACATATCTCAACTGCTCCACAAGGGACTCCGGGTTATGTTGATCCCCAATACCACCAGAACTTCCATCTTTCTGATAAAAGTGATGTCTACAGCTTTGGAGTGGTTTTGGTAGAGATAATAACTGCCTTGAAAGTGGTTGATTTCGGTCGACAGCAAAGTGAGGTCAATTTAGCAGCACTTGCTGTTGATAGGATTAGGAGGGGTGCCATAGATGAGATCATAGATCCCTTCCTTGAACCACATCAAGATGCTTGGACACTCTATTCAATTCATAAGGTGGCTGAGCTTGCATTTAGGTGTCTTGCTTTCCATAGCGACATGAGGCCTAGTATGATGGAAGTGGCAGAGGAGCTAGAACACATCAAGCGCAGTGGATGGGCATCCACCGAGGAAAATATGTGTCTAGCTTCATCAGTTGGGTCTGGTAACTCATCTCCTCGCAGAGGAAGTGACAAGTCACTGGGCGGTATTAAGTTGAATAAAGCAGGGCAAGGGAATGAGATATTGATCGTTACGCAGAAGACCGGAAGCTTTTTGAAATCAATGGAGGCAAAGGACAGCTCTCCTGTATCAGTGCAGGATCCTTGGTCAAGTGGACACAGCTCACCTTCAACAAACAGTTTGTTGGACAATGCAGTTCATTGA 2118 0.4613 MFLLHHHHTSFFIVLTILMALTRARNLTNCDRHCGGKTLNYPFGFSEGCEVKLNCTEDQVKVGGFLVQNITASTIFISIPAKCNRTMGSIKPLFNDNFAPTWNNSFLVQNCTEEQGGCVIPASTFTGGQAEVESCDSSSGNISCFTPQSQKQRNNVVVGDVLSYDELKNTRCKFLFSSVALGQSKELLFLQFQVVELGWWIQGSCHDSGCSQNATCTEVTNPQGKNSSGFRCQCLHGFQGDGFINGTGCRRVLSCSASTVTSGGCGKTTKIGVIVGVITTGVLAVAVLLSLVCYCARRRSAWLSKHTTAKRLLREAAGNSSVPFYPYKEIERATNSFSDKQRLGTGAFGTVYAGKLHNDEWVAIKKIRHRDTNGVDQVMNEIKLLSSVSHANLVRLLGCCIEEGEQILVYEYMPNGTLSQHLQRERGKGLPWTIRLTIATETAKAIAYLHSAIHPPIYHRDIKSSNILLDYSFKSKVADFGLSRLGMTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFGRQQSEVNLAALAVDRIRRGAIDEIIDPFLEPHQDAWTLYSIHKVAELAFRCLAFHSDMRPSMMEVAEELEHIKRSGWASTEENMCLASSVGSGNSSPRRGSDKSLGGIKLNKAGQGNEILIVTQKTGSFLKSMEAKDSSPVSVQDPWSSGHSSPSTNSLLDNAVH 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00909 705 MobiDBLite consensus disorder prediction 672 705 - -
Arst5g00909 705 ProSiteProfiles Protein kinase domain profile. 337 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00909 705 Gene3D Phosphorylase Kinase; domain 1 289 412 - -
Arst5g00909 705 SMART serkin_6 337 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00909 705 Pfam Protein kinase domain 338 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00909 705 ProSitePatterns Protein kinases ATP-binding region signature. 343 366 IPR017441 GO:0005524
Arst5g00909 705 MobiDBLite consensus disorder prediction 628 648 - -
Arst5g00909 705 Gene3D Laminin 208 245 - -
Arst5g00909 705 FunFam Wall-associated receptor kinase-like 20 413 622 - -
Arst5g00909 705 FunFam Wall-associated receptor kinase-like 14 304 412 - -
Arst5g00909 705 Gene3D Transferase(Phosphotransferase) domain 1 413 629 - -
Arst5g00909 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Arst5g00909 705 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 692 IPR044652 GO:0004672
Arst5g00909 705 SUPERFAMILY Protein kinase-like (PK-like) 318 610 IPR011009 -
Arst5g00909 705 ProSiteProfiles EGF-like domain profile. 201 244 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00909 Arst-Chr5 8572889 8577761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00909 7 702 Receptor kinase-like Gene Family AT2G23450 55.807 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Arst5g00909 Pkinase 8.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00909 - - gmx:100779130 1000.73