Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00891 ATGAATCGAACGCCGGCAGCGGCGGCGGGAGCTGGCGGAGGAGGGATGGAGTTGCCAATCATACACGAAAGTGATCGCTACGATTTCGTCCGTGACATAGGCTCCGGGAATTTCGGTGTGGCAAGGCTCATGAGGGACAAGCTCACCAAGGAGCTTGTTGCTGTTAAGTACATCGAACGCGGTGATAAGATTGATGAAAATGTTAAGAGAGAAATCATTAATCACAGGTCTCTAAGACATCCTAACATCATCAGGTTTAAAGAGGTCATTTTGACACCTACTCATTTGGCAATCGTAATGGAATATGCATCTGGAGGAGAATTGTTTGAGCGAATCTGCAATGCAGGGCGTTTTACTGAAGACGAGGCTCGATTCTTCTTTCAACAACTCATATCTGGGGTCAGCTATTGCCATGCAATGCAAGTATGTCACCGGGACTTGAAGTTGGAGAACACTTTGTTGGATGGAACTTCAGCTCTTCATTTGAAAATATGTGATTTTGGGTACTCCAAGTCTTCAGTGCTTCATTCACAACCAAAGTCAACAGTGGGGACTCCAGCATATATTGCTCCAGAAGTGTTGCTAAAGCAAGAGTATGATGGCAAGGTCGCGGATGTTTGGTCATGTGGAGTAACCTTATATGTGATGCTAGTGGGATCATATCCTTTTGAAGATCCTAATGAACCTAAAGACTTCAGGAAGACAATTCAGAGGGTCCTCAGCGTCCAGTACTCTATCCCAGACTTTGTTCAAGTATCTCCAGAGTGTCGCCACCTTATCTCAAGGATCTTTGTTTTTGACCCTGCTGAGAGGATCACCATTCCTGAAATCTTGAAAAATGAATGGTTTCTGAAGAATCTTCCGGCAGAGTTGATTGATGAAAAAATTATGGGTAACCAATTTGAAGAGCCAGATCAACCCATGCAGAGCATTGATGAGATCATGCAGATAATTTCAGAAGCTACAATACCACCGGTTAGGGCACATACGTTAGACCATTTTATGATGGATAACATCGATGTGGATGATGACATGGATGACTTGGACTCTGACTTCGAGCTTGATGTAGATAGCAGTGGGGAGATAGTATATGCTATATAA 1101 0.4378 MNRTPAAAAGAGGGGMELPIIHESDRYDFVRDIGSGNFGVARLMRDKLTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIIRFKEVILTPTHLAIVMEYASGGELFERICNAGRFTEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGTSALHLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKVADVWSCGVTLYVMLVGSYPFEDPNEPKDFRKTIQRVLSVQYSIPDFVQVSPECRHLISRIFVFDPAERITIPEILKNEWFLKNLPAELIDEKIMGNQFEEPDQPMQSIDEIMQIISEATIPPVRAHTLDHFMMDNIDVDDDMDDLDSDFELDVDSSGEIVYAI 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00891 366 SMART serkin_6 27 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00891 366 FunFam Serine/threonine-protein kinase SRK2E 103 291 - -
Arst5g00891 366 PANTHER SERINE/THREONINE KINASE 26 306 - -
Arst5g00891 366 SUPERFAMILY Protein kinase-like (PK-like) 21 323 IPR011009 -
Arst5g00891 366 ProSiteProfiles Protein kinase domain profile. 27 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00891 366 Gene3D Phosphorylase Kinase; domain 1 7 102 - -
Arst5g00891 366 ProSitePatterns Protein kinases ATP-binding region signature. 33 56 IPR017441 GO:0005524
Arst5g00891 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Arst5g00891 366 Gene3D Transferase(Phosphotransferase) domain 1 103 290 - -
Arst5g00891 366 Pfam Protein kinase domain 27 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00891 366 FunFam Serine/threonine-protein kinase SRK2E 18 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00891 Arst-Chr5 8387269 8392128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00891 26 294 CBL-interacting serine-threonine protein kinases AT5G25110 44.366 6.71e-69 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Arst5g00891 Pkinase 3.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00891 K14498 - gmx:100783967 616.69