Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00883 ATGGGTCTCTGCAATTCGAAACCCTACTCGAATCCCACCCGTTCTTCTCGAAATTTCGATCCTCATGGCAATTCTTCAACAGCTAATAATAATGATGGTGCTGGAGCTCATTCCAGCTCCGTTAATGGCGGAAACCCTAGCGCTGACGCACCCAACGACGGCGTTAAGAGATCCCCGTTCTTCCCATTCTACACTCCGAGTCCGGCACATTACTGGTTCTCCAAGAAGTCGCCGGCGGCGAGATCTCCGGCGACCTCCGACTCCACGCCCAGGCGGTTCTTCAAACGGCCGTTCCCGCCGCCATCTCCTGCGAAACACATAAGGGCGGTGCTCGCCCGGCGGCACGGTTCGGTGAAGCCTAACGAGGCCACCATACCGGAAGGTAGCGAGGCCGATGAGGTGGTTGCACTGGATAAGAATTTCGGGTTTTCGAAGCATTTTGGAAACAAATTTGAGGTTGGAAGTGAAGTTGGAAGAGGGCATTTTGGGTACACCTGTGCTGCCAAGTTCAAAAAAGGGGAACTGAAGGGGCAGCAGGTGGCAGTGAAAGTCATCCCCAAAGCTAAGATGACTACTGCCATTGCAATTGAGGATGTCCGAAGAGAAGTAAAAATATTGAGAGCTCTAACTGGGCACAAGAATCTTGTACAGTTCTACGATGCATATGAAGACCATGATAATGTCTATATAGTAATGGAATTGTGTGAAGGAGGGGAGCTGTTAGACAGAATCCTATCAAGGGGTGGAAAATACACTGAGGAAGATGCAAAGGCTGTCTTGAGACAAATATTAAATGTTGTTGCGTTTTGCCACCTGCAGGGTGTTGTGCATCGTGATCTTAAACCTGAGAACTTTTTGTTCACATCTAAGGATGACAACTCGGAGCTAAAGGCCATAGACTTTGGGTTGTCAGATTTTGTTAAACCAGATGAAAGGCTTAATGATATTGTTGGTAGTGCGTATTATGTGGCTCCTGAAGTTCTACATAGAGCTTACAGTACTGAGGCTGATATCTGGAGTATTGGAGTCATTGCATATATTTTATTATGTGGCAGCCGTCCCTTTTGGGCCCGAACTGAATCTGGTATCTTTCGTGCTGTATTGAAAGCTGATCCAAGTTTTGATGAACCTCCTTGGCCGTCTCTGTCAGCTGAGGCAAGGAATTTTGTTAAGCGACTATTAAATAAAGATCCACGGAAAAGAATGACTGCAGCACAAGCATTGAGTCATCCATGGATTAAAAGCAACAAGGATGTAAAAGTACCCCTGGATATTCTAATATTCAAGCTCATGAAAGCATATATGCGTTCCTCATCTCTACGAAAAGCAGCTTTAAGGGCACTGTCCAAGACGTTAACTGTAGACGAGCTATTTTATTTAAAGGAGCAGTTTACTCTTTTGGAGCCAAACAAAAATGGAACCATTAGCCTGGAGAACATCAAAGCAGCCTTGGTGAAAAATGCAACAGATGCTATGAAGGAGTCACGCATTCCTGACTTCCTTGGATCACTTAATGCATTGCAATATAGGAGGATGGATTTTGATGAGTTTTGTGCAGCTACACTTAGTGTTCATCAACTTGAAGCACTTGACCGGTGGGAGCAACATGCACGGTGTGCCTATGAACTTTTTGAAAAGGATGGAAACAGGGCTATAGTCATTGAAGAGCTAGCTTCGGAGCTTGGCCTTGGCCCATCTGTCCCTGTTCATGCTGTTCTTCATGATTGGATTCGGCACACTGATGGCAAGTTAAGCTTCCTTGGATTTGTGAAATTGCTGCATGGCCCATCTCGAAGTCTTGTAAAAGCTCAGTAG 1815 0.4579 MGLCNSKPYSNPTRSSRNFDPHGNSSTANNNDGAGAHSSSVNGGNPSADAPNDGVKRSPFFPFYTPSPAHYWFSKKSPAARSPATSDSTPRRFFKRPFPPPSPAKHIRAVLARRHGSVKPNEATIPEGSEADEVVALDKNFGFSKHFGNKFEVGSEVGRGHFGYTCAAKFKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDHDNVYIVMELCEGGELLDRILSRGGKYTEEDAKAVLRQILNVVAFCHLQGVVHRDLKPENFLFTSKDDNSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRAYSTEADIWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEPPWPSLSAEARNFVKRLLNKDPRKRMTAAQALSHPWIKSNKDVKVPLDILIFKLMKAYMRSSSLRKAALRALSKTLTVDELFYLKEQFTLLEPNKNGTISLENIKAALVKNATDAMKESRIPDFLGSLNALQYRRMDFDEFCAATLSVHQLEALDRWEQHARCAYELFEKDGNRAIVIEELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLVKAQ 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00883 604 PANTHER SERINE/THREONINE-PROTEIN KINASE 138 579 - -
Arst5g00883 604 Gene3D - 437 595 - -
Arst5g00883 604 ProSiteProfiles Protein kinase domain profile. 151 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00883 604 SUPERFAMILY EF-hand 441 595 IPR011992 -
Arst5g00883 604 FunFam CDPK-related kinase 1 449 522 - -
Arst5g00883 604 FunFam CDPK-related kinase 3 143 315 - -
Arst5g00883 604 Pfam Protein kinase domain 151 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00883 604 Gene3D Transferase(Phosphotransferase) domain 1 241 436 - -
Arst5g00883 604 CDD STKc_CAMK 150 412 - -
Arst5g00883 604 ProSiteProfiles EF-hand calcium-binding domain profile. 455 490 IPR002048 GO:0005509
Arst5g00883 604 SMART serkin_6 151 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00883 604 MobiDBLite consensus disorder prediction 1 54 - -
Arst5g00883 604 MobiDBLite consensus disorder prediction 74 100 - -
Arst5g00883 604 ProSitePatterns Protein kinases ATP-binding region signature. 157 183 IPR017441 GO:0005524
Arst5g00883 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Arst5g00883 604 MobiDBLite consensus disorder prediction 1 47 - -
Arst5g00883 604 FunFam Calcium-dependent protein kinase SK5 323 418 - -
Arst5g00883 604 Gene3D Phosphorylase Kinase; domain 1 144 240 - -
Arst5g00883 604 FunFam CDPK-related kinase 1 144 239 - -
Arst5g00883 604 SUPERFAMILY Protein kinase-like (PK-like) 148 441 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00883 Arst-Chr5 8229237 8233737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00883 1 604 EF-hand Containing Proteins AT3G50530 77.273 0.0 985
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Arst5g00883 Pkinase 3.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00883 K13412 - cave:132186080 1017.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00017 1 279399 287765 Arst5g00883 5 8229237 8233737 PCT