Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00867 ATGTCACAGAGATCGGTGCCGGCGCCGTTCTTGACGAAGACGTATGAGTTGGTGGATGATCGTGCAACGGACGACGTGATTTCGTGGAGTGAGAGTGGCAACACTTTTGTGGTGTGGAAGCATGCCGATTTCGCTAAGGATTTGCTTCCCAATTATTTCAAGCACAACAATTTCTCCAGCTTTGTTCGCCAGCTCAACACCTATGGTTTTCGAAAGATTGTGCCAGACAAATGGGAATTTGCCAACGAACATTTTAAGCGAGGCCAAAAAGAACTTCTCACGGAGATCAAACGCCGCAAGTCGGCGCACCCTGCGCCGCCGCCATCGGGGACCGAAAAATCCGGTGGCGACGGTAACTCTCTGTTGAACTCAGGCGGCGACGACATGGGATCGTCCTCCACCTCTTCACCTGATTCGAAGAACCCAGGATCTGTGGAAACAACAACGATAACAACAACAACAACTCCTCCTCCTCCTCATCAGTGCGCGAATTTATCGAGCGAGAACGAGAAATTGAAGAAGGACAACGAGACGCTAAATTGCGAGCTGGCACGTGCGAAGAAGCAGTGCGATGAGTTGGTGGCTTTCTTGAGGGACTGCCTTAAGGTGTGTCCTGATCAGATCAACCGCATCATGAGGCAAGGAAAATGCGGGTCCACCCGTGATCCGGTGCAATCTGATGACACTCTAGTTGATGATGACGAAAAACAAGTTGGTGAGGCCGCTGGACCCAGCACTTTGAAATTGTTTGGTGTTTGGTTGAAAGAGGAGAAGCCTAACAACAACCACAAGAGAGAGCGAGAAGGCCCAATGGGCTTTGGTGGGCCTCCTGCAAAGGAGATGAAGAAGACTACTACTACAGCTAATAGTAATAGTGTTGTTGACTTTGGTGGTTCCAATGTTAAGGTGATGATGAAGAGCAGCAAGGTCTGCAGCTGA 939 0.4984 MSQRSVPAPFLTKTYELVDDRATDDVISWSESGNTFVVWKHADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDKWEFANEHFKRGQKELLTEIKRRKSAHPAPPPSGTEKSGGDGNSLLNSGGDDMGSSSTSSPDSKNPGSVETTTITTTTTPPPPHQCANLSSENEKLKKDNETLNCELARAKKQCDELVAFLRDCLKVCPDQINRIMRQGKCGSTRDPVQSDDTLVDDDEKQVGEAAGPSTLKLFGVWLKEEKPNNNHKREREGPMGFGGPPAKEMKKTTTTANSNSVVDFGGSNVKVMMKSSKVCS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00867 312 MobiDBLite consensus disorder prediction 282 296 - -
Arst5g00867 312 ProSitePatterns HSF-type DNA-binding domain signature. 49 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst5g00867 312 Coils Coil 162 189 - -
Arst5g00867 312 SUPERFAMILY "Winged helix" DNA-binding domain 7 99 IPR036390 -
Arst5g00867 312 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 5 216 IPR027725 -
Arst5g00867 312 Gene3D - 2 100 IPR036388 -
Arst5g00867 312 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst5g00867 312 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst5g00867 312 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst5g00867 312 MobiDBLite consensus disorder prediction 113 161 - -
Arst5g00867 312 MobiDBLite consensus disorder prediction 97 161 - -
Arst5g00867 312 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst5g00867 312 FunFam Heat stress transcription factor B-4 2 100 - -
Arst5g00867 312 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst5g00867 312 MobiDBLite consensus disorder prediction 258 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00867 Arst-Chr5 7967430 7969802 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00867 2 312 HSF AT4G36990 49.068 3.48e-83 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Arst5g00867 HSF_DNA-bind 8.8e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00867 K09419 - gmx:100791543 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00867 5 7967430 7969802 Arst5g00867 5 7967430 7969802 ECH