Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00853 ATGGACTGGATTCGAGGACCAATCCTCGGCAGTGGAAGCTTCGCCACCGTCAGTTTAGCCACACCCAAGAACCCTTCCCTTTCGTTCCACTTTCCGGCAGCCGTTAAGTCCTCCGATCGTTTGACCTCCTTCTTCCTCGTTAACGAGGAACACGTCCTTGACCGCCTCGGTTCTTCTTGTCCTCGAATAGTTAAGTGCTTGGGCCACGACACCACCGTCGAAAACGGTGAGTCGTTTTACAACATCTTCCTCGAATACGCTTCCAACGGCACGCTCGCTGATCAGATGAAGAAGAATCAAGGTGGGAAGTTCGATGAGAAACAAGTAAGAAGGTACGCGAGGTCCATCATGGAAGGGTTGAAGCACATTCACGAGAATGGGTTCGTTCACTGCGATATTAAGCTTCAGAACATGCTTGTGTTCGAAAACGGCGAGGTGAAGATCTCGGATTTCGGGCTTGCAAAGGAGAAAGGTGCCACGGTGCAGCGTGGAGACAAGAAGTGGGAGTGCAGGGGAACGCCTCTCTACATGTCCCCTGAGTCGGTGAATGATAACGAGTATGAGTCACCGGCGGATATATGGGCCCTTGGATGCGCCGCCGTGGAGATGCTCACCGGAAAGCCAGCGTGGAATGTTAAGAGTGGGTCCAACATGTGGTCGCTGCTAATTCGGATTGGAGTTGGTGAAGAAATTCCGGTGATTCCGGAGGACTTGTCCGAACAGGGGAAGGACTTTTTGAGAAAGTGTTTCGTTAAGGATCCCAGGGAGAGGTGGACGGCGGAGATGCTCCTCAACCACCCGTTTCTCGCCGGTGAAGACAGCCATGATGCTTTGATCCATAACGAAATCTCGCCCAGAAGTAACTTTGACTTTCCTGATTGGGATTACACTTCCACGGTGAATGATTCTGCTGTCACCACTGTTTCCCCGCCTAAGGATTGGTTACCGCAGCTGGTGACGGAGCAGGGGTTGCCGGATTGGTCAGAATCGGAGGGCTGGATAAGTGTTCGGAGAAGAGTTATCGTGGAAGCTTCGTGA 1038 0.5222 MDWIRGPILGSGSFATVSLATPKNPSLSFHFPAAVKSSDRLTSFFLVNEEHVLDRLGSSCPRIVKCLGHDTTVENGESFYNIFLEYASNGTLADQMKKNQGGKFDEKQVRRYARSIMEGLKHIHENGFVHCDIKLQNMLVFENGEVKISDFGLAKEKGATVQRGDKKWECRGTPLYMSPESVNDNEYESPADIWALGCAAVEMLTGKPAWNVKSGSNMWSLLIRIGVGEEIPVIPEDLSEQGKDFLRKCFVKDPRERWTAEMLLNHPFLAGEDSHDALIHNEISPRSNFDFPDWDYTSTVNDSAVTTVSPPKDWLPQLVTEQGLPDWSESEGWISVRRRVIVEAS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00853 345 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 295 - -
Arst5g00853 345 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Arst5g00853 345 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Arst5g00853 345 CDD STKc_MAPKKK 2 269 - -
Arst5g00853 345 Gene3D Transferase(Phosphotransferase) domain 1 3 305 - -
Arst5g00853 345 SMART serkin_6 3 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00853 345 ProSiteProfiles Protein kinase domain profile. 3 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00853 345 SUPERFAMILY Protein kinase-like (PK-like) 3 317 IPR011009 -
Arst5g00853 345 Pfam Protein kinase domain 7 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00853 Arst-Chr5 7781252 7782658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00853 1 337 MAP Kinase Kinase Kinase AT5G67080 53.276 2.82e-127 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Arst5g00853 Pkinase 7.3e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00853 - - aip:107641670 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00853 5 7781252 7782658 Arst5g00853 5 7781252 7782658 ECH
Arst5g00853 5 7781252 7782658 Arst1g01337 1 13771318 13772815 PCT