Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00846 ATGATGTGTTCGGTTTGTGATATCACAGAAAATAATAATCAACAGGGTCAAGGGAACAGGCGAAACGCAGCACAAGGGAGAATGAGAATTTTCACTACTCCTTTATCAACTTCTGATACTGGTGGTAATAATAATTCGACATTGTTTTTTGAAAGTTTTTCTTCCTCAGCTATTGTCTCCCAAGAAAACAGAGAGACTTCTATTATGTTCCCAATTAACAATAACAATCCTGCTGCTGAAATAATCCACATCAATGACGAAGAACCAGATCTTGAATCATCATTTATAGAAGGCAATCTTAATTCTTTCTCTTCAATTTTACCAACAATGGAACAAACCAATCAAGATGCCTCAAATCTTTTAACATTACAAAGAAATTTGAGAATCAACACCGCCAACAACAACAACCGACAAGATGGTGTGTCACTTGATTTATCCTTACACCAGTTTGGCGGTGATGGCGGTGGCAGCTCTTCTACTATGGATGTCATCAGTGGCAGCGCTGGTGGTGGTGGAGGTGGAGATGGTCTCTTGACGAGCGTTCTCAACAATACTTCTACTAGGCGCATCATGCCTATCAAAAGAACTGCACCTGATTATGCTCGCCGAGAGTTTACAGTGGGTGAGAGCTCAAGTGCCGGTGGTGCTGGTGGTGGATCTGTTGCTCAACCTATGGCAGCCCCCAAGCGCCGCCCCACCGCTAATGAAAATGCGGCGCTGCGCGTTTCATCATCATCTAATACCTGCACTTGTACCCCTTCTCCCACTTGCGCTCTCCATGCTTCCGCCAATAATAATCTTTCTTCATCTTCCAGGGAACAACCCCATGAAACTGCTAACAACAACAACAACCCCCAAAATGTTGTTCGTGTTCCTTCTAGTTTGTGGCCAATTTCTGAGGTGCAACGAGCTCTTCAGTCTGATAGCTTTCAAGTCCTTCAACCTACTGCTACTACTACTCCTCCTCCTCCTCCTCCTCCTCCTAGTAGTAGTAATAATAACAATAATAACACAACACTTGGTATTATGCAACTTGGTGATGGTTCCTTTATTTACCCCCAACCTGTTTTTGATAGTAGCCACCACCACCACCAAATCCACCATGGCCACCAGCACACGCCAATTAATTCGTTATACCACCAAGGCTATCAACGTTTTTTCTCCACTGCTGGCACTTCTCCATTCCGCCCGGCCTCAATCAATTACATGGAGAATCTTCCTCCTCCTCATCATCATCCGTATGCCGGTTCTTCTTCTTCTTCTTCGTCTCCTTCCCCTCTTCCTTGGAGCACCGTGATTAGGCCAAGGGCTGTTCCTGTGTCTCTCACTCACCGAGTTGGAGGAAGTAATAGAGAATCTAACAACACCAGAAACAACTATCCTTTTTCTTCTCCTGCTGGAAGGGGAACAATCACTGTGACTCAGAATCGTGGAAACTCATCATCATCAAGCTTATTCCCCGGTGGGTCTCCTTCAACACGGCTACTCGAAAGCCTTGTACAAAACGCTGGTACCCCTTCTTCTGGATCTGGCGGTGGTCAGAATAATACAGCAGGTACTACCGTTGGAGCTGTTCCTGCAGTTCAGCAGCTGTCGAACGTTGCTCGTGCATGGATTCGAAGGCTGAACGCTCATGATGAGGCCTTGACGAGAACGTCACAATCTTCTACCCCTGATATTACTCCTCACAGGGCACTGCGAGCTTCTCCTATTGCTGAGATGTATAATTTGCCTACTTATTTTGCTGATGATTCAAGAAGGCTTAGACAAGAGATCCGCACTGCCATTGATCATTTGCGTAATGGAGGTTCCGTCCGACTGGAGGAACTTTTAATTCTTGATTACTCCATTGTGCTGAACTTGCTTGACAACATTGAGGAGGAAGAGGATGATGTTCCGCAGCAGTTTTATGAGTATCTGGGAGACGGGCAGCGAGTGACCAACCCCGATTTAGGACTGACGGAAACTGAGGTTGCAATATGTATTGGACGGGAAATTTTCCAAACTGTTGGTGAGCAGCCTCAGAACATTGATGCATGCGGCATATGTCAGGAGGACTATGTTCACGGTGAAGAGCTTGGGAGATTGGATTGTGCGCACAGATATCACCTTTCTTGCATCAGGCAGTGGTTGCTCATCAAGAACAGATGCCCAATCTGCAAGAAAATGGCTCTCACCATCATAGACTTGGAGGACGACGAGGACGATGATGAGTGA 2217 0.4583 MMCSVCDITENNNQQGQGNRRNAAQGRMRIFTTPLSTSDTGGNNNSTLFFESFSSSAIVSQENRETSIMFPINNNNPAAEIIHINDEEPDLESSFIEGNLNSFSSILPTMEQTNQDASNLLTLQRNLRINTANNNNRQDGVSLDLSLHQFGGDGGGSSSTMDVISGSAGGGGGGDGLLTSVLNNTSTRRIMPIKRTAPDYARREFTVGESSSAGGAGGGSVAQPMAAPKRRPTANENAALRVSSSSNTCTCTPSPTCALHASANNNLSSSSREQPHETANNNNNPQNVVRVPSSLWPISEVQRALQSDSFQVLQPTATTTPPPPPPPPSSSNNNNNNTTLGIMQLGDGSFIYPQPVFDSSHHHHQIHHGHQHTPINSLYHQGYQRFFSTAGTSPFRPASINYMENLPPPHHHPYAGSSSSSSSPSPLPWSTVIRPRAVPVSLTHRVGGSNRESNNTRNNYPFSSPAGRGTITVTQNRGNSSSSSLFPGGSPSTRLLESLVQNAGTPSSGSGGGQNNTAGTTVGAVPAVQQLSNVARAWIRRLNAHDEALTRTSQSSTPDITPHRALRASPIAEMYNLPTYFADDSRRLRQEIRTAIDHLRNGGSVRLEELLILDYSIVLNLLDNIEEEEDDVPQQFYEYLGDGQRVTNPDLGLTETEVAICIGREIFQTVGEQPQNIDACGICQEDYVHGEELGRLDCAHRYHLSCIRQWLLIKNRCPICKKMALTIIDLEDDEDDDE 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00846 738 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 664 725 IPR013083 -
Arst5g00846 738 ProSiteProfiles Zinc finger RING-type profile. 680 721 IPR001841 -
Arst5g00846 738 MobiDBLite consensus disorder prediction 444 493 - -
Arst5g00846 738 SUPERFAMILY RING/U-box 679 728 - -
Arst5g00846 738 MobiDBLite consensus disorder prediction 414 429 - -
Arst5g00846 738 MobiDBLite consensus disorder prediction 404 430 - -
Arst5g00846 738 MobiDBLite consensus disorder prediction 446 493 - -
Arst5g00846 738 MobiDBLite consensus disorder prediction 237 290 - -
Arst5g00846 738 MobiDBLite consensus disorder prediction 317 331 - -
Arst5g00846 738 Pfam Ring finger domain 679 721 IPR001841 -
Arst5g00846 738 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 377 725 IPR045191 GO:0061630
Arst5g00846 738 SMART ring_2 680 720 IPR001841 -
Arst5g00846 738 MobiDBLite consensus disorder prediction 314 343 - -
Arst5g00846 738 MobiDBLite consensus disorder prediction 207 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00846 Arst-Chr5 7700142 7704534 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00846 591 725 C3H Transcription Factor Family AT2G15530 38.889 5.43e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00846 - - adu:110280903 1314.29